RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 GABRG3Q99928 467 aa11.66□□□□□ -0.54
SND1-215ENST00000492772 MED10Q9BTT4 135 aa11.66□□□□□ -0.54
SND1-215ENST00000492772 LRRC27Q9C0I9 530 aa11.66□□□□□ -0.54
SND1-215ENST00000492772 TNMDQ9H2S6 317 aa11.66□□□□□ -0.54
SND1-215ENST00000492772 CD248Q9HCU0 757 aa11.66□□□□□ -0.54
SND1-215ENST00000492772 IL37Q9NZH6 218 aa11.66□□□□□ -0.54
SND1-215ENST00000492772 GMIPQ9P107 970 aa11.66□□□□□ -0.54
SND1-215ENST00000492772 WDR35Q9P2L0 1181 aa11.66□□□□□ -0.54
SND1-215ENST00000492772 HCN2Q9UL51 889 aa11.66□□□□□ -0.54
SND1-215ENST00000492772 APOBEC2Q9Y235 224 aaKnown RBP11.66□□□□□ -0.54
SND1-215ENST00000492772 GPSM3Q9Y4H4 160 aa11.66□□□□□ -0.54
SND1-215ENST00000492772 MORC2Q9Y6X9 1032 aaPredicted RBP11.66□□□□□ -0.54
SND1-215ENST00000492772 IGSF10Q6WRI0 2623 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 LAMA5O15230 3695 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 NEDD8-MDP1E9PL57 170 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 GFRA2O00451 464 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 SH3BP5O60239 455 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 TLR5O60602 858 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 CST3P01034 146 aaPredicted RBP11.65□□□□□ -0.54
SND1-215ENST00000492772 TYRP14679 529 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 PDCP20941 246 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 SNRPFP62306 86 aaKnown RBP11.65□□□□□ -0.54
SND1-215ENST00000492772 GOLGA8FQ08AF8 430 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 GOLGA8DPQ0D2H9 430 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 HTR3DQ70Z44 454 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 SCAMP5Q8TAC9 235 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 KCNK16Q96T55 309 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 BBS2Q9BXC9 721 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 CCDC86Q9H6F5 360 aaKnown RBP11.65□□□□□ -0.54
SND1-215ENST00000492772 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.65□□□□□ -0.54
SND1-215ENST00000492772 AGPAT3Q9NRZ7 376 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 KRT82Q9NSB4 513 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 MARK1Q9P0L2 795 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 NXF1Q9UBU9 619 aaKnown RBP11.65□□□□□ -0.54
SND1-215ENST00000492772 CHORDC1Q9UHD1 332 aaPredicted RBP11.65□□□□□ -0.54
SND1-215ENST00000492772 LSM7Q9UK45 103 aaKnown RBP11.65□□□□□ -0.54
SND1-215ENST00000492772 NFE2L3Q9Y4A8 694 aa11.65□□□□□ -0.54
SND1-215ENST00000492772 A0A087X0B3 334 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 MEI4A8MW99 385 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 TRIM24O15164 1050 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 AP1G2O75843 785 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 CLSTN1O94985 981 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 HOXD13P35453 343 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 DGKGP49619 791 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 CYP2J2P51589 502 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 MYL6P60660 151 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 GRIK2Q13002 908 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 STARD3Q14849 445 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 ZNF699Q32M78 642 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 KIAA1324Q6UXG2 1013 aaKnown RBP11.64□□□□□ -0.55
SND1-215ENST00000492772 EPM2AIP1Q7L775 607 aaPredicted RBP11.64□□□□□ -0.55
SND1-215ENST00000492772 GLRX5Q86SX6 157 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 PDZD3Q86UT5 571 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 XXYLT1Q8NBI6 393 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 RDH13Q8NBN7 331 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 GLIS3Q8NEA6 775 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 CCDC127Q96BQ5 260 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 MRGPRX1Q96LB2 322 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 CAMK1GQ96NX5 476 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 ACOX2Q99424 681 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 XYLT2Q9H1B5 865 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 CUEDC2Q9H467 287 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 FBXO44Q9H4M3 255 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 SMYD3Q9H7B4 428 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 VRTNQ9H8Y1 702 aa11.64□□□□□ -0.55
SND1-215ENST00000492772 TLR8Q9NR97 1041 aaKnown RBP11.64□□□□□ -0.55
SND1-215ENST00000492772 GCN1Q92616 2671 aaKnown RBP11.64□□□□□ -0.55
SND1-215ENST00000492772 MYH10P35580 1976 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 A0A1B0GTW7 788 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 PRRT4C9JH25 899 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 NPC1O15118 1278 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 PHACTR2O75167 634 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 CER1O95813 267 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 ZNF883P0CG24 379 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 CD6P30203 668 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 CEBPZQ03701 1054 aaKnown RBP11.63□□□□□ -0.55
SND1-215ENST00000492772 ZNF667Q5HYK9 610 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 FAM26FQ5R3K3 315 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 CCNI2Q6ZMN8 369 aaPredicted RBP11.63□□□□□ -0.55
SND1-215ENST00000492772 PAQR9Q6ZVX9 377 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 METTL3Q86U44 580 aaKnown RBP11.63□□□□□ -0.55
SND1-215ENST00000492772 PDILTQ8N807 584 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 SPRYD3Q8NCJ5 442 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 ZNF507Q8TCN5 953 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 HPS3Q969F9 1004 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 WBP2Q969T9 261 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 PANK2Q9BZ23 570 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 TRIM9Q9C026 710 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 UPF2Q9HAU5 1272 aaKnown RBP11.63□□□□□ -0.55
SND1-215ENST00000492772 CYLDQ9NQC7 956 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 CACNA2D2Q9NY47 1150 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 CGNQ9P2M7 1197 aaKnown RBP11.63□□□□□ -0.55
SND1-215ENST00000492772 RAD54BQ9Y620 910 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 PTPRBP23467 1997 aa11.63□□□□□ -0.55
SND1-215ENST00000492772 PLXNB3Q9ULL4 1909 aa11.62□□□□□ -0.55
SND1-215ENST00000492772 TGFB1I1O43294 461 aa11.62□□□□□ -0.55
SND1-215ENST00000492772 GREM1O60565 184 aa11.62□□□□□ -0.55
SND1-215ENST00000492772 P4HA1P13674 534 aa11.62□□□□□ -0.55
SND1-215ENST00000492772 TRIM21P19474 475 aaKnown RBP11.62□□□□□ -0.55
SND1-215ENST00000492772 ATP5C1P36542 298 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms