RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 RBM12Q9NTZ6 932 aaKnown RBP7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 FAM86C1Q9NVL1 165 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 C2orf42Q9NWW7 574 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 CLIC5Q9NZA1 410 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 HESX1Q9UBX0 185 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 LIMA1Q9UHB6 759 aaKnown RBP7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 NAGPAQ9UK23 515 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 OBSL1O75147 1896 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 NUP210Q8TEM1 1887 aaPredicted RBP7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 FAM186AA6NE01 2351 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 FRYLO94915 3013 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 E2F8A0AVK6 867 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 ANTXRLA6NF34 631 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 YJEFN3A6XGL0 299 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 E7ENQ6 273 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 PROB1E7EW31 1015 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 M0QYV0 167 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 PIK3R2O00459 728 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 TRDMT1O14717 391 aaKnown RBP7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 EPHB6O15197 1021 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 LETM1O95202 739 aaPredicted RBP7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 KLKB1P03952 638 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 CYP17A1P05093 508 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 IRF1P10914 325 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 ATP1A3P13637 1013 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 LCP1P13796 627 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 RFX1P22670 979 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 GNA15P30679 374 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 HOXC13P31276 330 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 ATP5C1P36542 298 aaKnown RBP7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 OPRD1P41143 372 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 IFNAR2P48551 515 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 PSEN1P49768 467 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 COPB1P53618 953 aaKnown RBP7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 DAOAP59103 153 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 YWHAGP61981 247 aaKnown RBP eCLIP7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 MYL5Q02045 173 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 ADIGQ0VDE8 80 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 MESP2Q0VG99 397 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 MTAPQ13126 283 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 CCINQ13939 588 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 ANGPT1Q15389 498 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 DHCR24Q15392 516 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 STILQ15468 1287 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 KLHL40Q2TBA0 621 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 TMEM196Q5HYL7 178 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 FSTL4Q6MZW2 842 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 HTR3DQ70Z44 454 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 ERMP1Q7Z2K6 904 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 BBS7Q8IWZ6 715 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 DHX40Q8IX18 779 aaKnown RBP7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 FAM71AQ8IYT1 594 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 SCML4Q8N228 414 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 AOPEPQ8N6M6 819 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 ATP2A3Q93084 1043 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 HSFY1Q96LI6 401 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 FAM81BQ96LP2 452 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 LSM14BQ9BX40 385 aaKnown RBP7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 GANQ9H2C0 597 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 CHRDQ9H2X0 955 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 LRRC4Q9HBW1 653 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 DNMT3LQ9UJW3 386 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 SIK3Q9Y2K2 1263 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 MRPS17Q9Y2R5 130 aaKnown RBP7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 FHOD1Q9Y613 1164 aa7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 RIF1Q5UIP0 2472 aaKnown RBP7.55□□□□□ -1.2
PDLIM1-204ENST00000492511 DENND4CQ5VZ89 1909 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 KIF26AQ9ULI4 1882 aaPredicted RBP7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 NCAM2O15394 837 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 THAP12O43422 761 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 STC2O76061 302 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 EGFP01133 1207 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 FYNP06241 537 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 SP9P0CG40 484 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 CHRM1P11229 460 aaPredicted RBP7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 RALAP11233 206 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 TDGF1P13385 188 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 UCHL3P15374 230 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 USP8P40818 1118 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 MAGEA9P43362 315 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 SLC6A11P48066 632 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 SLC8A3P57103 927 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 EFEMP1Q12805 493 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 DRAP1Q14919 205 aaPredicted RBP7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 IQCB1Q15051 598 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 C10orf120Q5SQS8 335 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 BSPRYQ5W0U4 402 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 SMYD5Q6GMV2 418 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 PKN3Q6P5Z2 889 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 C1orf228Q6PIY5 440 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 MAMSTRQ6ZN01 415 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 Q6ZNB5 142 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 Q6ZS52 159 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 TMEM110Q86TL2 294 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 SLC47A2Q86VL8 602 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 C12orf40Q86WS4 652 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 DDX42Q86XP3 938 aaKnown RBP eCLIP7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 TMEM25Q86YD3 366 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 SFTPA1Q8IWL2 248 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 SCUBE3Q8IX30 993 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms