RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 RBAKQ9NYW8 714 aaPredicted RBP13.95□□□□□ -0.18
HDAC3-213ENST00000492506 CFAP97Q9P2B7 532 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 IMPACTQ9P2X3 320 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 CDH9Q9ULB4 789 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 RRP15Q9Y3B9 282 aaKnown RBP13.95□□□□□ -0.18
HDAC3-213ENST00000492506 NME7Q9Y5B8 376 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 MYH10P35580 1976 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 PTPRJQ12913 1337 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 ARHGAP33O14559 1287 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 SLC9A3R1O14745 358 aaPredicted RBP13.94□□□□□ -0.18
HDAC3-213ENST00000492506 AP5Z1O43299 807 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 OPHN1O60890 802 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 F13A1P00488 732 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 KRT19P08727 400 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 ADH5P11766 374 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 GABRG2P18507 467 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 GRIK1P39086 918 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 PPP3CCP48454 512 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 NOP14P78316 857 aaKnown RBP13.94□□□□□ -0.18
HDAC3-213ENST00000492506 RPL6Q02878 288 aaKnown RBP13.94□□□□□ -0.18
HDAC3-213ENST00000492506 KDSRQ06136 332 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 GFPT1Q06210 699 aaPredicted RBP13.94□□□□□ -0.18
HDAC3-213ENST00000492506 TYRO3Q06418 890 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 ZNF33AQ06730 810 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 SCAPQ12770 1279 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 C19orf48Q6RUI8 117 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 RBM43Q6ZSC3 357 aaKnown RBP13.94□□□□□ -0.18
HDAC3-213ENST00000492506 SLC41A1Q8IVJ1 513 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 PGBD3Q8N328 593 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 PCED1BQ96HM7 432 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 CAMK1GQ96NX5 476 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 TRIM5Q9C035 493 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 MTMR12Q9C0I1 747 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 PDE11AQ9HCR9 933 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 CD248Q9HCU0 757 aa13.94□□□□□ -0.18
HDAC3-213ENST00000492506 A0A1W2PQF6 199 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 GOLGA8IPA6NC78 632 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 GOLGA8JA6NMD2 632 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 ADH1CP00326 375 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 GARTP22102 1010 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 ACTN2P35609 894 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 PLA2G4AP47712 749 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 CASP5P51878 434 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 ATXN3P54252 364 aaPredicted RBP13.93□□□□□ -0.18
HDAC3-213ENST00000492506 CACNA2D1P54289 1103 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 TAF10Q12962 218 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 LY6G5CQ5SRR4 150 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 DYMQ7RTS9 669 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 PDZD3Q86UT5 571 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 MIB1Q86YT6 1006 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 CCDC150Q8NCX0 1101 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 KCNV2Q8TDN2 545 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 ADAMTS14Q8WXS8 1223 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 DNAJC19Q96DA6 116 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 ZFRQ96KR1 1074 aaKnown RBP13.93□□□□□ -0.18
HDAC3-213ENST00000492506 C8orf48Q96LL4 319 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 CBWD1Q9BRT8 395 aa13.93□□□□□ -0.18
HDAC3-213ENST00000492506 IGHV1OR15-9A0A0B4J2B8 117 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.92□□□□□ -0.18
HDAC3-213ENST00000492506 F8VP50 259 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 SH3BP5O60239 455 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 LDHAP00338 332 aaKnown RBP13.92□□□□□ -0.18
HDAC3-213ENST00000492506 PDGFRBP09619 1106 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 WARSP23381 471 aaKnown RBP13.92□□□□□ -0.18
HDAC3-213ENST00000492506 RDXP35241 583 aaKnown RBP13.92□□□□□ -0.18
HDAC3-213ENST00000492506 LONP1P36776 959 aaKnown RBP13.92□□□□□ -0.18
HDAC3-213ENST00000492506 CLCN6P51797 869 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 CYP27A1Q02318 531 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 HNRNPDQ14103 355 aaKnown RBP13.92□□□□□ -0.18
HDAC3-213ENST00000492506 TRIP6Q15654 476 aaKnown RBP13.92□□□□□ -0.18
HDAC3-213ENST00000492506 MAPRE1Q15691 268 aaKnown RBP13.92□□□□□ -0.18
HDAC3-213ENST00000492506 SLC36A4Q6YBV0 504 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 USP49Q70CQ1 688 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 ZNF513Q8N8E2 541 aaPredicted RBP13.92□□□□□ -0.18
HDAC3-213ENST00000492506 KRI1Q8N9T8 703 aaKnown RBP13.92□□□□□ -0.18
HDAC3-213ENST00000492506 OR5B17Q8NGF7 314 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 MYCBPAPQ8TBZ2 947 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 HPDLQ96IR7 371 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 ACCSQ96QU6 501 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 FGFBP2Q9BYJ0 223 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 MRPL44Q9H9J2 332 aaKnown RBP13.92□□□□□ -0.18
HDAC3-213ENST00000492506 INTS13Q9NVM9 706 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 ZNF446Q9NWS9 450 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 EHD2Q9NZN4 543 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 EXOC7Q9UPT5 735 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 STARD13Q9Y3M8 1113 aa13.92□□□□□ -0.18
HDAC3-213ENST00000492506 FLNBO75369 2602 aaKnown RBP13.91□□□□□ -0.18
HDAC3-213ENST00000492506 A0A1W2PQD8 194 aa13.91□□□□□ -0.18
HDAC3-213ENST00000492506 E2F8A0AVK6 867 aa13.91□□□□□ -0.18
HDAC3-213ENST00000492506 TRIM66O15016 1216 aa13.91□□□□□ -0.18
HDAC3-213ENST00000492506 TRIM24O15164 1050 aa13.91□□□□□ -0.18
HDAC3-213ENST00000492506 HOXC11O43248 304 aaPredicted RBP13.91□□□□□ -0.18
HDAC3-213ENST00000492506 STX6O43752 255 aa13.91□□□□□ -0.18
HDAC3-213ENST00000492506 TULP3O75386 442 aa13.91□□□□□ -0.18
HDAC3-213ENST00000492506 ABL1P00519 1130 aa13.91□□□□□ -0.18
HDAC3-213ENST00000492506 ANXA13P27216 316 aa13.91□□□□□ -0.18
HDAC3-213ENST00000492506 GSCP56915 257 aaPredicted RBP13.91□□□□□ -0.18
HDAC3-213ENST00000492506 GAD2Q05329 585 aa13.91□□□□□ -0.18
HDAC3-213ENST00000492506 MYO1EQ12965 1108 aa13.91□□□□□ -0.18
HDAC3-213ENST00000492506 SLC14A1Q13336 389 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms