RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 NACA2Q9H009 215 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 BLZF1Q9H2G9 400 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 KCTD10Q9H3F6 313 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 SMOC1Q9H4F8 434 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 EXOC1Q9NV70 894 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 LSM7Q9UK45 103 aaKnown RBP9.65□□□□□ -0.86
HDAC3-212ENST00000492407 SCML2Q9UQR0 700 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 ZNF510Q9Y2H8 683 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 FRMD4BQ9Y2L6 1034 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 SPTBN2O15020 2390 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 TMEM8BA6NDV4 472 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 NRDCO43847 1150 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 CACNG3O60359 315 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 TLR5O60602 858 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 ADAM23O75077 832 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 NR3C1P04150 777 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 FAM200BP0CF97 657 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 HNRNPLP14866 589 aaKnown RBP eCLIP9.64□□□□□ -0.87
HDAC3-212ENST00000492407 BCKDHBP21953 392 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 NTSR1P30989 418 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 AFMP43652 599 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 PLA2G4AP47712 749 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 CASP4P49662 377 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 NDST1P52848 882 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 IFRD2Q12894 506 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-212ENST00000492407 HNRNPDQ14103 355 aaKnown RBP9.64□□□□□ -0.87
HDAC3-212ENST00000492407 DUOXA1Q1HG43 343 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 SH3PXD2AQ5TCZ1 1133 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 LYSMD4Q5XG99 296 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 GRAMD4Q6IC98 578 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 PSAPL1Q6NUJ1 521 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 INTS8Q75QN2 995 aaKnown RBP9.64□□□□□ -0.87
HDAC3-212ENST00000492407 ACOT1Q86TX2 421 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 METTL3Q86U44 580 aaKnown RBP9.64□□□□□ -0.87
HDAC3-212ENST00000492407 TMEM25Q86YD3 366 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 BBS7Q8IWZ6 715 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 ZNF513Q8N8E2 541 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-212ENST00000492407 KIAA0895Q8NCT3 520 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 ZMIZ2Q8NF64 920 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 SLC2A14Q8TDB8 520 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 PIGKQ92643 395 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 CCDC47Q96A33 483 aaKnown RBP9.64□□□□□ -0.87
HDAC3-212ENST00000492407 IMPG2Q9BZV3 1241 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 SDCBP2Q9H190 292 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 SLC32A1Q9H598 525 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 CCSER2Q9H7U1 834 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 YY1AP1Q9H869 796 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 KRT82Q9NSB4 513 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 FOXD4L1Q9NU39 408 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 CLIC5Q9NZA1 410 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 GMIPQ9P107 970 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 FBXO10Q9UK96 956 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 PILRBQ9UKJ0 227 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 SLC6A14Q9UN76 642 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 WASF3Q9UPY6 502 aa9.64□□□□□ -0.87
HDAC3-212ENST00000492407 ANAPC1Q9H1A4 1944 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 FAM237AA0A1B0GTK4 181 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 TCRBV21S2A2A0A5A6 115 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 ACTN4O43707 911 aaKnown RBP9.63□□□□□ -0.87
HDAC3-212ENST00000492407 SERPINF2P08697 491 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 RPL13P26373 211 aaKnown RBP9.63□□□□□ -0.87
HDAC3-212ENST00000492407 CASP1P29466 404 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 GTF2H1P32780 548 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 ASPAP45381 313 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 IRX4P78413 519 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 KDSRQ06136 332 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 MESP2Q0VG99 397 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 ANO4Q32M45 955 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 KMT5BQ4FZB7 885 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 TRIM61Q5EBN2 209 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 C10orf76Q5T2E6 689 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 EMC10Q5UCC4 262 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 KDF1Q8NAX2 398 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-212ENST00000492407 HMGB4Q8WW32 186 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 GABRG3Q99928 467 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 NT5C1AQ9BXI3 368 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 SERTAD1Q9UHV2 236 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 MBD1Q9UIS9 605 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-212ENST00000492407 DNMT3LQ9UJW3 386 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 HPSEQ9Y251 543 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 INVSQ9Y283 1065 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 SLC27A6Q9Y2P4 619 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 NFE2L3Q9Y4A8 694 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 USP3Q9Y6I4 520 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 CHD8Q9HCK8 2581 aa9.63□□□□□ -0.87
HDAC3-212ENST00000492407 ZNF638Q14966 1978 aaKnown RBP9.63□□□□□ -0.87
HDAC3-212ENST00000492407 CACNA1BQ00975 2339 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 PTPRDP23468 1912 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 A0A1W2PQF6 199 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 HHLA1C9JL84 531 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 H0Y626 953 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 STX10O60499 249 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 BEST1O76090 585 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 RHOBTB3O94955 611 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 TRIM16O95361 564 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 CISD3P0C7P0 127 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 HOXB2P14652 356 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 TYRP14679 529 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 GABRG2P18507 467 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms