RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 ZSCAN5DPP0CG00 497 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 RBP3P10745 1247 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 DRD4P21917 467 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 LMO2P25791 158 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 CCT5P48643 541 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 LHX1P48742 406 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
USP4-214ENST00000491791 RAB27AP51159 221 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 AIF1P55008 147 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 CDH6P55285 790 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 IRX5P78411 483 aaPredicted RBP11.19□□□□□ -0.62
USP4-214ENST00000491791 TAF5Q15542 800 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 KCTD19Q17RG1 926 aaPredicted RBP11.19□□□□□ -0.62
USP4-214ENST00000491791 SMTNL2Q2TAL5 461 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 EFHC2Q5JST6 749 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 FAM26DQ5JW98 314 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 CCSAPQ6IQ19 270 aaPredicted RBP11.19□□□□□ -0.62
USP4-214ENST00000491791 PPP1R21Q6ZMI0 780 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 OSTM1Q86WC4 334 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 RFX6Q8HWS3 928 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 SCUBE3Q8IX30 993 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 ADGRF2Q8IZF7 708 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 FUKQ8N0W3 1084 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 CNPY4Q8N129 248 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 SCML4Q8N228 414 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 B3GALNT2Q8NCR0 500 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 KLHDC9Q8NEP7 349 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 FAM172AQ8WUF8 416 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 RSAD2Q8WXG1 361 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 P3H4Q92791 437 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 ARHGEF2Q92974 986 aaKnown RBP11.19□□□□□ -0.62
USP4-214ENST00000491791 LENG1Q96BZ8 264 aaPredicted RBP11.19□□□□□ -0.62
USP4-214ENST00000491791 ACSF2Q96CM8 615 aaPredicted RBP11.19□□□□□ -0.62
USP4-214ENST00000491791 CHMP6Q96FZ7 201 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 SLC9A7Q96T83 725 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 FAM118BQ9BPY3 351 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 DHRS4Q9BTZ2 278 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 MAK16Q9BXY0 300 aaKnown RBP11.19□□□□□ -0.62
USP4-214ENST00000491791 DPEP3Q9H4B8 488 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 NAALADL1Q9UQQ1 740 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 GINS2Q9Y248 185 aa11.19□□□□□ -0.62
USP4-214ENST00000491791 TRIP12Q14669 1992 aaPredicted RBP11.19□□□□□ -0.62
USP4-214ENST00000491791 CUL9Q8IWT3 2517 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 COL6A3P12111 3177 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 ALPK3Q96L96 1907 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 GPR182O15218 404 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 SPAG6O75602 509 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 FBXO21O94952 628 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 ETS1P14921 441 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 CHN1P15882 459 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 PTPN1P18031 435 aaKnown RBP11.18□□□□□ -0.62
USP4-214ENST00000491791 GCAP28676 217 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 L1CAMP32004 1257 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 MATKP42679 507 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 VPS41P49754 854 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 SEC24CP53992 1094 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 GDF10P55107 478 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 ARL4CP56559 192 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 ROR1Q01973 937 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 ADCY1Q08828 1119 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 DSC3Q14574 896 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 HIF1AQ16665 826 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 LONRF1Q17RB8 773 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 C15orf59Q2T9L4 293 aaPredicted RBP11.18□□□□□ -0.62
USP4-214ENST00000491791 NBPF20Q3BBV1 942 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 SLC25A52Q3SY17 297 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 GLRA4Q5JXX5 417 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 SH3PXD2AQ5TCZ1 1133 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 TTC19Q6DKK2 380 aaPredicted RBP11.18□□□□□ -0.62
USP4-214ENST00000491791 TWF2Q6IBS0 349 aaKnown RBP11.18□□□□□ -0.62
USP4-214ENST00000491791 VSTM1Q6UX27 236 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 PAQR9Q6ZVX9 377 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 PIGWQ7Z7B1 504 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 UNC45BQ8IWX7 931 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 MCUQ8NE86 351 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 PCDH19Q8TAB3 1148 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 HSPH1Q92598 858 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 SLC2A13Q96QE2 648 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 LBHD1Q9BQE6 289 aaPredicted RBP11.18□□□□□ -0.62
USP4-214ENST00000491791 SNRNP25Q9BV90 132 aaKnown RBP11.18□□□□□ -0.62
USP4-214ENST00000491791 CALN1Q9BXU9 219 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 TSPYL2Q9H2G4 693 aaPredicted RBP11.18□□□□□ -0.62
USP4-214ENST00000491791 SPC25Q9HBM1 224 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 SAYSD1Q9NPB0 183 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 FAM49BQ9NUQ9 324 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 FAM105AQ9NUU6 356 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 INTS9Q9NV88 658 aaKnown RBP11.18□□□□□ -0.62
USP4-214ENST00000491791 MTMR10Q9NXD2 777 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.18□□□□□ -0.62
USP4-214ENST00000491791 PAK5Q9P286 719 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 PRKAG2Q9UGJ0 569 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 ST3GAL5Q9UNP4 418 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 CDY2AQ9Y6F7 541 aa11.18□□□□□ -0.62
USP4-214ENST00000491791 MYADML2A6NDP7 307 aa11.17□□□□□ -0.62
USP4-214ENST00000491791 HACD1B0YJ81 288 aa11.17□□□□□ -0.62
USP4-214ENST00000491791 CYB561D2O14569 222 aa11.17□□□□□ -0.62
USP4-214ENST00000491791 APOL1O14791 398 aa11.17□□□□□ -0.62
USP4-214ENST00000491791 PRPF4O43172 522 aaKnown RBP eCLIP11.17□□□□□ -0.62
USP4-214ENST00000491791 GCATO75600 419 aa11.17□□□□□ -0.62
USP4-214ENST00000491791 CHRNA1P02708 482 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms