RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 TNNI1P19237 187 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 CASP4P49662 377 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 PGFP49763 221 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 CDH8P55286 799 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 MYL6P60660 151 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 ORC1Q13415 861 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 CUL4AQ13619 759 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 WDR72Q3MJ13 1102 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 LY6G5CQ5SRR4 150 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 TDRD10Q5VZ19 366 aaKnown RBP11.78□□□□□ -0.52
NCSTN-214ENST00000491390 SCARA5Q6ZMJ2 495 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 WDR49Q8IV35 697 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 SCAMP5Q8TAC9 235 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 DHX58Q96C10 678 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 KCNK16Q96T55 309 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 PNKPQ96T60 521 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 TRIM9Q9C026 710 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 SMYD3Q9H7B4 428 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 CCSER2Q9H7U1 834 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 ARHGEF4Q9NR80 690 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 A0A1W2PQD8 194 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 A8MXQ7 604 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 AP5Z1O43299 807 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 COCHO43405 550 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 OLFM2O95897 454 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 ITPKBP27987 946 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 KIR2DL1P43626 348 aaPredicted RBP11.77□□□□□ -0.53
NCSTN-214ENST00000491390 PDE6CP51160 858 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 TNNC1P63316 161 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 NOP14P78316 857 aaKnown RBP11.77□□□□□ -0.53
NCSTN-214ENST00000491390 ASIC1P78348 528 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 MRPS21P82921 87 aaKnown RBP11.77□□□□□ -0.53
NCSTN-214ENST00000491390 SRSF1Q07955 248 aaKnown RBP eCLIP11.77□□□□□ -0.53
NCSTN-214ENST00000491390 CYP24A1Q07973 514 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 SLC39A14Q15043 492 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 MAPRE1Q15691 268 aaKnown RBP11.77□□□□□ -0.53
NCSTN-214ENST00000491390 SNRNP35Q16560 246 aaKnown RBP11.77□□□□□ -0.53
NCSTN-214ENST00000491390 FOXD4L5Q5VV16 416 aaPredicted RBP11.77□□□□□ -0.53
NCSTN-214ENST00000491390 MARCH9Q86YJ5 346 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 MIB1Q86YT6 1006 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 BBS7Q8IWZ6 715 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 PIP4K2CQ8TBX8 421 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 FOXD4L4Q8WXT5 416 aaPredicted RBP11.77□□□□□ -0.53
NCSTN-214ENST00000491390 FBXO32Q969P5 355 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 ZFRQ96KR1 1074 aaKnown RBP11.77□□□□□ -0.53
NCSTN-214ENST00000491390 C8orf48Q96LL4 319 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 CGRRF1Q99675 332 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 HNRNPABQ99729 332 aaKnown RBP11.77□□□□□ -0.53
NCSTN-214ENST00000491390 GZF1Q9H116 711 aaPredicted RBP11.77□□□□□ -0.53
NCSTN-214ENST00000491390 BLZF1Q9H2G9 400 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 AGPAT3Q9NRZ7 376 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 GMIPQ9P107 970 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 TFIP11Q9UBB9 837 aaKnown RBP11.77□□□□□ -0.53
NCSTN-214ENST00000491390 HCN2Q9UL51 889 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 MTMR6Q9Y217 621 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 PCDHB9Q9Y5E1 797 aa11.77□□□□□ -0.53
NCSTN-214ENST00000491390 CEP192Q8TEP8 1941 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 MYH10P35580 1976 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 ADH1CP00326 375 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 SYPP08247 313 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 YWHAQP27348 245 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 BYSLQ13895 437 aaKnown RBP11.76□□□□□ -0.53
NCSTN-214ENST00000491390 PSMD6Q15008 389 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 STK38Q15208 465 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 SURF1Q15526 300 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 E2F4Q16254 413 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 FOXD4L6Q3SYB3 417 aaPredicted RBP11.76□□□□□ -0.53
NCSTN-214ENST00000491390 HSF5Q4G112 596 aaPredicted RBP11.76□□□□□ -0.53
NCSTN-214ENST00000491390 FOXD4L3Q6VB84 417 aaPredicted RBP11.76□□□□□ -0.53
NCSTN-214ENST00000491390 EPM2AIP1Q7L775 607 aaPredicted RBP11.76□□□□□ -0.53
NCSTN-214ENST00000491390 TMEM25Q86YD3 366 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 SLC41A1Q8IVJ1 513 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 PHTF2Q8N3S3 785 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 B3GALNT2Q8NCR0 500 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 PLEKHO2Q8TD55 490 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 SLITRK1Q96PX8 696 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 MED10Q9BTT4 135 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 SDCBP2Q9H190 292 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 SLC6A17Q9H1V8 727 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 CLMPQ9H6B4 373 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 CD93Q9NPY3 652 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.76□□□□□ -0.53
NCSTN-214ENST00000491390 DACH1Q9UI36 760 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 BOD1L1Q8NFC6 3051 aa11.76□□□□□ -0.53
NCSTN-214ENST00000491390 TBC1D3BA6NDS4 549 aa11.75□□□□□ -0.53
NCSTN-214ENST00000491390 CAPN8A6NHC0 703 aa11.75□□□□□ -0.53
NCSTN-214ENST00000491390 E9PAM4 449 aa11.75□□□□□ -0.53
NCSTN-214ENST00000491390 SLC9A3R1O14745 358 aaPredicted RBP11.75□□□□□ -0.53
NCSTN-214ENST00000491390 KIAA0391O15091 583 aaKnown RBP11.75□□□□□ -0.53
NCSTN-214ENST00000491390 TULP3O75386 442 aa11.75□□□□□ -0.53
NCSTN-214ENST00000491390 TACC1O75410 805 aa11.75□□□□□ -0.53
NCSTN-214ENST00000491390 BEST1O76090 585 aa11.75□□□□□ -0.53
NCSTN-214ENST00000491390 TBX18O95935 607 aa11.75□□□□□ -0.53
NCSTN-214ENST00000491390 CCDC130P13994 396 aa11.75□□□□□ -0.53
NCSTN-214ENST00000491390 PFKLP17858 780 aa11.75□□□□□ -0.53
NCSTN-214ENST00000491390 PDCP20941 246 aa11.75□□□□□ -0.53
NCSTN-214ENST00000491390 GRIA2P42262 883 aa11.75□□□□□ -0.53
NCSTN-214ENST00000491390 SLC5A3P53794 718 aa11.75□□□□□ -0.53
NCSTN-214ENST00000491390 CFHR1Q03591 330 aa11.75□□□□□ -0.53
NCSTN-214ENST00000491390 ZNF33AQ06730 810 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms