RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 SHC4Q6S5L8 630 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 LDHAL6AQ6ZMR3 332 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 MFSD6Q6ZSS7 791 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 C11orf57Q6ZUT1 292 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 STOX1Q6ZVD7 989 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 RASGRP2Q7LDG7 609 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 SRGAP1Q7Z6B7 1085 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 GRASPQ7Z6J2 395 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 CLNKQ7Z7G1 428 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 RNF180Q86T96 592 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 RPAINQ86UA6 219 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 SPATS2Q86XZ4 545 aaKnown RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC41A1Q8IVJ1 513 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 MB21D2Q8IYB1 491 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 TC2NQ8N9U0 490 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 IQUBQ8NA54 791 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ANKRD20A12PQ8NF67 263 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 OR8K1Q8NGG5 319 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC30A5Q8TAD4 765 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 KLHDC4Q8TBB5 520 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ZCRB1Q8TBF4 217 aaKnown RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 TSPEARQ8WU66 669 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 NUP133Q8WUM0 1156 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 SMARCE1Q969G3 411 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 HDAC10Q969S8 669 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 LRRC59Q96AG4 307 aaKnown RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 EDC3Q96F86 508 aaKnown RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNF764Q96H86 408 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 CLPTM1LQ96KA5 538 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PPP1R13BQ96KQ4 1090 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 HAPLN3Q96S86 360 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 STRBPQ96SI9 672 aaKnown RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ADAM2Q99965 735 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 CARD6Q9BX69 1037 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 FUT8Q9BYC5 575 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 LRRC2Q9BYS8 371 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 TPSD1Q9BZJ3 242 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 C11orf54Q9H0W9 315 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 GOLPH3LQ9H4A5 285 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 RNF41Q9H4P4 317 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 SYNPO2LQ9H987 977 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 VIPAS39Q9H9C1 493 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ZCCHC17Q9NP64 241 aaKnown RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC17A6Q9P2U8 582 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 KCNE5Q9UJ90 142 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ZHX1Q9UKY1 873 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 RAB21Q9UL25 225 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 NAP1L2Q9ULW6 460 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 GPR45Q9Y5Y3 372 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 RIMBP3CA6NJZ7 1639 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 RIMBP3BA6NNM3 1639 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 RIMBP3Q9UFD9 1639 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 NRXN3Q9Y4C0 1643 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 MYH7P12883 1935 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 NRKQ7Z2Y5 1582 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 AFDNP55196 1824 aaKnown RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 SPEF2Q9C093 1822 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 LTN1O94822 1766 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 LMO7Q8WWI1 1683 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 MYH11P35749 1972 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 AKAP11Q9UKA4 1901 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 MYH2Q9UKX2 1941 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CEP170BQ9Y4F5 1589 aaPredicted RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 A0A0U1RQG5 324 aaPredicted RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 ANKRD18BA2A2Z9 1011 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CTAGE9A4FU28 777 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 BTBD18B2RXH4 712 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 ERVV-1B6SEH8 477 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 IFIT3O14879 490 aaKnown RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 GRM6O15303 877 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 VPS4BO75351 444 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 EIF3JO75822 258 aaKnown RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 PRKD3O94806 890 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 MT-CO1P00395 513 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 A1BGP04217 495 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 MYL1P05976 194 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 ELANEP08246 267 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNF18P17022 549 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 GCSHP23434 173 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 PCSK1P29120 753 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 ACTN2P35609 894 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 ADD2P35612 726 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 FOLR3P41439 243 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 TNNT3P45378 269 aaPredicted RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 PHKA1P46020 1223 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 GPR3P46089 330 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 TRAPPC10P48553 1259 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 METAP2P50579 478 aaKnown RBP eCLIP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 TOB1P50616 345 aaPredicted RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 PLCD1P51178 756 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 VAV2P52735 878 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 ADKP55263 362 aaKnown RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 EVA1CP58658 441 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 RPS7P62081 194 aaKnown RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 PSMC1P62191 440 aaKnown RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 SIM1P81133 766 aaPredicted RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 AMPD3Q01432 767 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 KIF23Q02241 960 aaPredicted RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 COL10A1Q03692 680 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms