RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 MLF2Q15773 248 aaPredicted RBP13.46□□□□□ -0.25
LIMK1-207ENST00000491052 IER5LQ5T953 404 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 BTBD8Q5XKL5 378 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 TRIM68Q6AZZ1 485 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 TPRG1Q6ZUI0 275 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 BHLHA9Q7RTU4 235 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 FLCNQ8NFG4 579 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 TTC8Q8TAM2 541 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 CLEC4CQ8WTT0 213 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 STK32AQ8WU08 396 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 RNF139Q8WU17 664 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 SLC20A1Q8WUM9 679 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 EDEM1Q92611 657 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 GOLGA1Q92805 767 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 SLC4A5Q9BY07 1137 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 SYNCQ9H7C4 482 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 RASAL2Q9UJF2 1139 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 DNMT3LQ9UJW3 386 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 SH3BP1Q9Y3L3 701 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 WNT6Q9Y6F9 365 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 MYO18AQ92614 2054 aaKnown RBP13.45□□□□□ -0.26
LIMK1-207ENST00000491052 FAM170AA1A519 330 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 PRR33A8MZF0 331 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 ARNTLO00327 626 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 SART1O43290 800 aaKnown RBP13.45□□□□□ -0.26
LIMK1-207ENST00000491052 GPR37L1O60883 481 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 TPM3P06753 285 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 MMEP08473 750 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 ARSAP15289 507 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 TCF3P15923 654 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 KPNA1P52294 538 aaPredicted RBP13.45□□□□□ -0.26
LIMK1-207ENST00000491052 TNK2Q07912 1038 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 GOLGA8FQ08AF8 430 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 GOLGA8DPQ0D2H9 430 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 EFEMP1Q12805 493 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 PDGFRLQ15198 375 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 SLC44A4Q53GD3 710 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 BSPRYQ5W0U4 402 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 HFE2Q6ZVN8 426 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 MIB1Q86YT6 1006 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 SUGP1Q8IWZ8 645 aaKnown RBP13.45□□□□□ -0.26
LIMK1-207ENST00000491052 SCUBE3Q8IX30 993 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 SCML4Q8N228 414 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 TMEM35BQ8NCS4 154 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 IPO4Q8TEX9 1081 aaKnown RBP13.45□□□□□ -0.26
LIMK1-207ENST00000491052 OSCP1Q8WVF1 389 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 IRGQQ8WZA9 623 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 FAM149B1Q96BN6 582 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 SHDQ96IW2 340 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 PPP1R13BQ96KQ4 1090 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 ZFRQ96KR1 1074 aaKnown RBP13.45□□□□□ -0.26
LIMK1-207ENST00000491052 CPXM1Q96SM3 734 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 LHX5Q9H2C1 402 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 EBF3Q9H4W6 596 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 TBC1D17Q9HA65 648 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 DUS2Q9NX74 493 aaKnown RBP13.45□□□□□ -0.26
LIMK1-207ENST00000491052 GTSE1Q9NYZ3 720 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 TJP2Q9UDY2 1190 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 NOCTQ9UK39 431 aaKnown RBP13.45□□□□□ -0.26
LIMK1-207ENST00000491052 STRIP2Q9ULQ0 834 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 PIAS3Q9Y6X2 628 aa13.45□□□□□ -0.26
LIMK1-207ENST00000491052 LTFP02788 710 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 FERP16591 822 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 RPL34P49207 117 aaKnown RBP13.44□□□□□ -0.26
LIMK1-207ENST00000491052 CDR2Q01850 454 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 PRKCQQ04759 706 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 ITPRIPL2Q3MIP1 535 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 KLHDC10Q6PID8 442 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 ZNF677Q86XU0 584 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 CPA6Q8N4T0 437 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 FBXL6Q8N531 539 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 WDTC1Q8N5D0 677 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 DDX1Q92499 740 aaKnown RBP13.44□□□□□ -0.26
LIMK1-207ENST00000491052 ATP2A3Q93084 1043 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 FAM83CQ9BQN1 747 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 LRFN3Q9BTN0 628 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 KLF16Q9BXK1 252 aaPredicted RBP13.44□□□□□ -0.26
LIMK1-207ENST00000491052 XPO4Q9C0E2 1151 aaKnown RBP13.44□□□□□ -0.26
LIMK1-207ENST00000491052 TRPV5Q9NQA5 729 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 HPS4Q9NQG7 708 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 ABCC13Q9NSE7 274 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 OLA1Q9NTK5 396 aaKnown RBP13.44□□□□□ -0.26
LIMK1-207ENST00000491052 MARCH2Q9P0N8 246 aa13.44□□□□□ -0.26
LIMK1-207ENST00000491052 E2F8A0AVK6 867 aa13.43□□□□□ -0.26
LIMK1-207ENST00000491052 LRRC53A6NM62 1247 aa13.43□□□□□ -0.26
LIMK1-207ENST00000491052 SLC9A3R1O14745 358 aaPredicted RBP13.43□□□□□ -0.26
LIMK1-207ENST00000491052 PAPSS1O43252 624 aaPredicted RBP13.43□□□□□ -0.26
LIMK1-207ENST00000491052 CBFA2T2O43439 604 aa13.43□□□□□ -0.26
LIMK1-207ENST00000491052 LSM8O95777 96 aaKnown RBP13.43□□□□□ -0.26
LIMK1-207ENST00000491052 HMBSP08397 361 aa13.43□□□□□ -0.26
LIMK1-207ENST00000491052 CCDC172P0C7W6 258 aa13.43□□□□□ -0.26
LIMK1-207ENST00000491052 SOX9P48436 509 aa13.43□□□□□ -0.26
LIMK1-207ENST00000491052 SNX16P57768 344 aa13.43□□□□□ -0.26
LIMK1-207ENST00000491052 ASIC2Q16515 512 aa13.43□□□□□ -0.26
LIMK1-207ENST00000491052 EML3Q32P44 896 aa13.43□□□□□ -0.26
LIMK1-207ENST00000491052 PTPN20Q4JDL3 420 aa13.43□□□□□ -0.26
LIMK1-207ENST00000491052 NAA35Q5VZE5 725 aa13.43□□□□□ -0.26
LIMK1-207ENST00000491052 BMP8AQ7Z5Y6 402 aa13.43□□□□□ -0.26
LIMK1-207ENST00000491052 TMEM110Q86TL2 294 aa13.43□□□□□ -0.26
LIMK1-207ENST00000491052 FMNL3Q8IVF7 1028 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms