RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 OBSL1O75147 1896 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 C2orf78A6NCI8 922 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 GOLGA6L6A8MZA4 724 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 COCHO43405 550 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 HSF2BPO75031 334 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 ABL1P00519 1130 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 LTFP02788 710 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 ERBB2P04626 1255 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 FCARP24071 287 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 MRE11P49959 708 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 SLC6A3Q01959 620 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 MSANTD2Q6P1R3 559 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 WDR59Q6PJI9 974 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 OLFML1Q6UWY5 402 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 TC2NQ8N9U0 490 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 ADAMTS19Q8TE59 1207 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 CPA5Q8WXQ8 436 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 PANX2Q96RD6 677 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 KCNK12Q9HB15 430 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 POPDC2Q9HBU9 364 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 TRPC7Q9HCX4 862 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 OSER1Q9NX31 292 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 ARHGAP20Q9P2F6 1191 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 DNMT3LQ9UJW3 386 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 XIRP2A4UGR9 3374 aa16.59■□□□□ 0.25
TRA2A-208ENST00000490942 PRUNE2Q8WUY3 3088 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 DDX3XO00571 662 aaKnown RBP eCLIP16.58■□□□□ 0.244e-21■■■■■ 31.7
TRA2A-208ENST00000490942 SKILP12757 684 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 KPNA1P52294 538 aaPredicted RBP16.58■□□□□ 0.24
TRA2A-208ENST00000490942 ADKP55263 362 aaKnown RBP16.58■□□□□ 0.24
TRA2A-208ENST00000490942 GOLGA8FQ08AF8 430 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 GOLGA8DPQ0D2H9 430 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 FCHO2Q0JRZ9 810 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 PTP4A2Q12974 167 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 MON1BQ7L1V2 547 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 XYLT1Q86Y38 959 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 ARL14EPQ8N8R7 260 aaPredicted RBP16.58■□□□□ 0.24
TRA2A-208ENST00000490942 RNF139Q8WU17 664 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 USP13Q92995 863 aaPredicted RBP16.58■□□□□ 0.24
TRA2A-208ENST00000490942 TRIM11Q96F44 468 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 NACA2Q9H009 215 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 RNF38Q9H0F5 515 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 ISCUQ9H1K1 167 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 CCSER2Q9H7U1 834 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 SEPT11Q9NVA2 429 aaKnown RBP16.58■□□□□ 0.24
TRA2A-208ENST00000490942 RRN3Q9NYV6 651 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 ADAM22Q9P0K1 906 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 LIMD1Q9UGP4 676 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 NUMBLQ9Y6R0 609 aa16.58■□□□□ 0.24
TRA2A-208ENST00000490942 NCOR1O75376 2440 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 ANAPC1Q9H1A4 1944 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 NUP210Q8TEM1 1887 aaPredicted RBP16.57■□□□□ 0.24
TRA2A-208ENST00000490942 DPYSL4O14531 572 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 RTN2O75298 545 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 MYBL1P10243 752 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 PSMC3P17980 439 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 FECHP22830 423 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 PGFP49763 221 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 COG7P83436 770 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 NNTQ13423 1086 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 ASTE1Q2TB18 679 aaPredicted RBP16.57■□□□□ 0.24
TRA2A-208ENST00000490942 OR6B2Q6IFH4 312 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 PARM1Q6UWI2 310 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 MMS22LQ6ZRQ5 1243 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 FAM183BPQ6ZVS7 135 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 RSRC2Q7L4I2 434 aaKnown RBP16.57■□□□□ 0.24
TRA2A-208ENST00000490942 MFSD6LQ8IWD5 586 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 FGF14Q92915 247 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 SLC2A13Q96QE2 648 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 SLC22A12Q96S37 553 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 UHRF1Q96T88 793 aaPredicted RBP16.57■□□□□ 0.24
TRA2A-208ENST00000490942 TRPV5Q9NQA5 729 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 ADAMTS1Q9UHI8 967 aa16.57■□□□□ 0.24
TRA2A-208ENST00000490942 HBS1LQ9Y450 684 aaKnown RBP16.57■□□□□ 0.24
TRA2A-208ENST00000490942 PIK3R2O00459 728 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 PRAMEF12O95522 483 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 FYNP06241 537 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 MBL2P11226 248 aaPredicted RBP16.56■□□□□ 0.24
TRA2A-208ENST00000490942 GSDMDP57764 484 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 USP4Q13107 963 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 MTA1Q13330 715 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 TDGQ13569 410 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 ZNF77Q15935 545 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 SLC18A3Q16572 532 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 C10orf120Q5SQS8 335 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 TANGO2Q6ICL3 276 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 GPIHBP1Q8IV16 184 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 MCOLN2Q8IZK6 566 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 C3orf20Q8ND61 904 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 BPIFB1Q8TDL5 484 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 CLEC4CQ8WTT0 213 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 KHSRPQ92945 711 aaKnown RBP eCLIP16.56■□□□□ 0.244e-10■□□□□ 10.4
TRA2A-208ENST00000490942 FAM149B1Q96BN6 582 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 ZFRQ96KR1 1074 aaKnown RBP16.56■□□□□ 0.24
TRA2A-208ENST00000490942 CYP2S1Q96SQ9 504 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 C11orf70Q9BRQ4 267 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 KLF16Q9BXK1 252 aaPredicted RBP16.56■□□□□ 0.24
TRA2A-208ENST00000490942 SMOC2Q9H3U7 446 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 THG1LQ9NWX6 298 aaKnown RBP16.56■□□□□ 0.24
TRA2A-208ENST00000490942 TJP2Q9UDY2 1190 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms