RNA–Protein interactions for RNA: ENST00000490500.5

RBBP4-213, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 3

Gene RBBP4, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-213ENST00000490500 TERB1Q8NA31 727 aa13.1□□□□□ -0.31
RBBP4-213ENST00000490500 HMGB4Q8WW32 186 aa13.1□□□□□ -0.31
RBBP4-213ENST00000490500 HNRNPABQ99729 332 aaKnown RBP13.1□□□□□ -0.31
RBBP4-213ENST00000490500 APOBEC3GQ9HC16 384 aaKnown RBP13.1□□□□□ -0.31
RBBP4-213ENST00000490500 CD248Q9HCU0 757 aa13.1□□□□□ -0.31
RBBP4-213ENST00000490500 TMEM9BQ9NQ34 198 aa13.1□□□□□ -0.31
RBBP4-213ENST00000490500 TLR8Q9NR97 1041 aaKnown RBP13.1□□□□□ -0.31
RBBP4-213ENST00000490500 FAM49BQ9NUQ9 324 aa13.1□□□□□ -0.31
RBBP4-213ENST00000490500 TMEM74BQ9NUR3 256 aa13.1□□□□□ -0.31
RBBP4-213ENST00000490500 SCML2Q9UQR0 700 aa13.1□□□□□ -0.31
RBBP4-213ENST00000490500 HPSEQ9Y251 543 aa13.1□□□□□ -0.31
RBBP4-213ENST00000490500 FRYQ5TBA9 3013 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 A0A1B0GVL5 298 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 A0A1W2PQF6 199 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 MAPK13O15264 365 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 CLSTN1O94985 981 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 MYL1P05976 194 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 FAM200BP0CF97 657 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 IRF1P10914 325 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 CSRP1P21291 193 aaKnown RBP13.09□□□□□ -0.31
RBBP4-213ENST00000490500 ADORA2BP29275 332 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 VAMP7P51809 220 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 ANO4Q32M45 955 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 PREPLQ4J6C6 727 aaPredicted RBP13.09□□□□□ -0.31
RBBP4-213ENST00000490500 SPDYCQ5MJ68 293 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 C10orf76Q5T2E6 689 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 SH3PXD2AQ5TCZ1 1133 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 CEP135Q66GS9 1140 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 KLHDC10Q6PID8 442 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 CLEC20AQ6ZU45 233 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 SYT12Q8IV01 421 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 HSCBQ8IWL3 235 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 ZNF513Q8N8E2 541 aaPredicted RBP13.09□□□□□ -0.31
RBBP4-213ENST00000490500 SPACA7Q96KW9 195 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 NACA2Q9H009 215 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 NMUR1Q9HB89 426 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 MARK1Q9P0L2 795 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 BCCIPQ9P287 314 aaKnown RBP eCLIP13.09□□□□□ -0.31
RBBP4-213ENST00000490500 USP25Q9UHP3 1055 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 WASF3Q9UPY6 502 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 MYO16Q9Y6X6 1858 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 MYO18AQ92614 2054 aaKnown RBP13.09□□□□□ -0.31
RBBP4-213ENST00000490500 KIAA1549LQ6ZVL6 1849 aa13.09□□□□□ -0.31
RBBP4-213ENST00000490500 MYOFQ9NZM1 2061 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 HELZP42694 1942 aaKnown RBP13.08□□□□□ -0.32
RBBP4-213ENST00000490500 PRRT4C9JH25 899 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 CYP26A1O43174 497 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 MAP3K13O43283 966 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 CACNG3O60359 315 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 GABRG2P18507 467 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 NTSR1P30989 418 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 ATP5C1P36542 298 aaKnown RBP13.08□□□□□ -0.32
RBBP4-213ENST00000490500 PIK3CAP42336 1068 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 MCCD1P59942 119 aaPredicted RBP13.08□□□□□ -0.32
RBBP4-213ENST00000490500 PPP3CAQ08209 521 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 BYSLQ13895 437 aaKnown RBP13.08□□□□□ -0.32
RBBP4-213ENST00000490500 NFIL3Q16649 462 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 TRIM61Q5EBN2 209 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 PEAR1Q5VY43 1037 aaPredicted RBP13.08□□□□□ -0.32
RBBP4-213ENST00000490500 GRAMD4Q6IC98 578 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 Q6ZNB5 142 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 ARMCX6Q7L4S7 300 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 TRMT11Q7Z4G4 463 aaKnown RBP13.08□□□□□ -0.32
RBBP4-213ENST00000490500 CYFIP2Q96F07 1278 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 P2RY11Q96G91 374 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 ACOX2Q99424 681 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 NT5C1AQ9BXI3 368 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 CYP3A43Q9HB55 503 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 PNPLA8Q9NP80 782 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.08□□□□□ -0.322e-7■■■■■ 132.6
RBBP4-213ENST00000490500 DNAJC17Q9NVM6 304 aaKnown RBP13.08□□□□□ -0.32
RBBP4-213ENST00000490500 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.08□□□□□ -0.32
RBBP4-213ENST00000490500 PILRBQ9UKJ0 227 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 CIZ1Q9ULV3 898 aaPredicted RBP13.08□□□□□ -0.32
RBBP4-213ENST00000490500 FRMD4BQ9Y2L6 1034 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 IGF2RP11717 2491 aa13.08□□□□□ -0.32
RBBP4-213ENST00000490500 ASCC3Q8N3C0 2202 aaKnown RBP13.07□□□□□ -0.32
RBBP4-213ENST00000490500 FAM237AA0A1B0GTK4 181 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 A0A1W2PQH9 124 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 NEDD8-MDP1E9PL57 170 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 MDM4O15151 490 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 CALUO43852 315 aaPredicted RBP13.07□□□□□ -0.32
RBBP4-213ENST00000490500 CILPO75339 1184 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 RHOBTB3O94955 611 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 HSP90AA1P07900 732 aaKnown RBP13.07□□□□□ -0.32
RBBP4-213ENST00000490500 CISD3P0C7P0 127 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 CEACAM1P13688 526 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 HOXB2P14652 356 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 TYRP14679 529 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 ACO1P21399 889 aaKnown RBP13.07□□□□□ -0.32
RBBP4-213ENST00000490500 ITPKAP23677 461 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 WASP42768 502 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 GCLMP48507 274 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 KIF11P52732 1056 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 ZNF252P-AS1Q0IIN9 211 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 LMAN2Q12907 356 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 LYSMD4Q5XG99 296 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 EGFLAMQ63HQ2 1017 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 KIAA1211LQ6NV74 962 aa13.07□□□□□ -0.32
RBBP4-213ENST00000490500 SLC23A3Q6PIS1 610 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms