RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 TMEM60Q9H2L4 133 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 DDX43Q9NXZ2 648 aaKnown RBP16.06■□□□□ 0.16
UFD1-209ENST00000489406 KPNA7A9QM74 516 aa16.05■□□□□ 0.16
UFD1-209ENST00000489406 DXOO77932 396 aaKnown RBP16.05■□□□□ 0.16
UFD1-209ENST00000489406 OAS1P00973 400 aaKnown RBP16.05■□□□□ 0.16
UFD1-209ENST00000489406 ADRB2P07550 413 aa16.05■□□□□ 0.16
UFD1-209ENST00000489406 C21orf59P57076 290 aa16.05■□□□□ 0.16
UFD1-209ENST00000489406 TMEM132DQ14C87 1099 aa16.05■□□□□ 0.16
UFD1-209ENST00000489406 SHBQ15464 509 aa16.05■□□□□ 0.16
UFD1-209ENST00000489406 CFAP221Q4G0U5 840 aa16.05■□□□□ 0.16
UFD1-209ENST00000489406 FBXL16Q8N461 479 aa16.05■□□□□ 0.16
UFD1-209ENST00000489406 ERMNQ8TAM6 284 aa16.05■□□□□ 0.16
UFD1-209ENST00000489406 PKMYT1Q99640 499 aa16.05■□□□□ 0.16
UFD1-209ENST00000489406 ACBD6Q9BR61 282 aa16.05■□□□□ 0.16
UFD1-209ENST00000489406 ADAMTS1Q9UHI8 967 aa16.05■□□□□ 0.16
UFD1-209ENST00000489406 CLEC18AA5D8T8 446 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 ACSL1P33121 698 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 EVCP57679 992 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 MYL7Q01449 175 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 CLEC18BQ6UXF7 455 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 DENND5BQ6ZUT9 1274 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 PDCL2Q8N4E4 241 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 CLEC18CQ8NCF0 446 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 BIRC7Q96CA5 298 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 BICD1Q96G01 975 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 XPO6Q96QU8 1125 aaKnown RBP16.04■□□□□ 0.16
UFD1-209ENST00000489406 ARHGAP9Q9BRR9 750 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 TRIM9Q9C026 710 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 DPP3Q9NY33 737 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 SH3BP1Q9Y3L3 701 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 ITPR2Q14571 2701 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 NUMA1Q14980 2115 aa16.04■□□□□ 0.16
UFD1-209ENST00000489406 ITPR3Q14573 2671 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 NEDD8-MDP1E9PL57 170 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 FAM189A1O60320 539 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 DTNBO60941 627 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 USP12O75317 370 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 FSBPO95073 299 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 CKMT2P17540 419 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 XBP1P17861 261 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 RPS6KB1P23443 525 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 LSSP48449 732 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 MAPK7Q13164 816 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 SV2CQ496J9 727 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 WBP2Q969T9 261 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 LIN37Q96GY3 246 aaPredicted RBP16.03■□□□□ 0.16
UFD1-209ENST00000489406 SPATA17Q96L03 361 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 MMS19Q96T76 1030 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 ACE2Q9BYF1 805 aaPredicted RBP16.03■□□□□ 0.16
UFD1-209ENST00000489406 LRRC4CQ9HCJ2 640 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 ASCL3Q9NQ33 180 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 THSD1Q9NS62 852 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 LRWD1Q9UFC0 647 aa16.03■□□□□ 0.16
UFD1-209ENST00000489406 OGTO15294 1046 aa16.02■□□□□ 0.16
UFD1-209ENST00000489406 HCRTO43612 131 aa16.02■□□□□ 0.16
UFD1-209ENST00000489406 SYNCRIPO60506 623 aaKnown RBP16.02■□□□□ 0.16
UFD1-209ENST00000489406 MAPTP10636 758 aaKnown RBP16.02■□□□□ 0.16
UFD1-209ENST00000489406 TYRP14679 529 aa16.02■□□□□ 0.16
UFD1-209ENST00000489406 CD27P26842 260 aa16.02■□□□□ 0.16
UFD1-209ENST00000489406 MAGEA11P43364 429 aa16.02■□□□□ 0.16
UFD1-209ENST00000489406 FOSBP53539 338 aa16.02■□□□□ 0.16
UFD1-209ENST00000489406 STK3Q13188 491 aa16.02■□□□□ 0.16
UFD1-209ENST00000489406 KYAT1Q16773 422 aa16.02■□□□□ 0.16
UFD1-209ENST00000489406 CPLX2Q6PUV4 134 aaKnown RBP16.02■□□□□ 0.16
UFD1-209ENST00000489406 CD302Q8IX05 232 aa16.02■□□□□ 0.16
UFD1-209ENST00000489406 TMEM161BQ8NDZ6 487 aa16.02■□□□□ 0.16
UFD1-209ENST00000489406 FUBP3Q96I24 572 aaKnown RBP eCLIP16.02■□□□□ 0.16
UFD1-209ENST00000489406 NTPCRQ9BSD7 190 aaKnown RBP16.02■□□□□ 0.16
UFD1-209ENST00000489406 BBS2Q9BXC9 721 aa16.02■□□□□ 0.16
UFD1-209ENST00000489406 POLR1BQ9H9Y6 1135 aa16.02■□□□□ 0.16
UFD1-209ENST00000489406 L1RE1Q9UN81 338 aa16.02■□□□□ 0.16
UFD1-209ENST00000489406 KIAA1024Q9UPX6 916 aa16.02■□□□□ 0.16
UFD1-209ENST00000489406 SPTBN1Q01082 2364 aaKnown RBP16.02■□□□□ 0.15
UFD1-209ENST00000489406 BSNQ9UPA5 3926 aa16.02■□□□□ 0.15
UFD1-209ENST00000489406 VILLO15195 856 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 CACNG3O60359 315 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 TSPAN3O60637 253 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 IRF1P10914 325 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 CCT6AP40227 531 aaKnown RBP16.01■□□□□ 0.15
UFD1-209ENST00000489406 PPP3CCP48454 512 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 DGKGP49619 791 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 COPAP53621 1224 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 ST3GAL1Q11201 340 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 ZSCAN23Q3MJ62 389 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 ARL13BQ3SXY8 428 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 XKR5Q6UX68 686 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 OSTM1Q86WC4 334 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 EXTL1Q92935 676 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 TNFRSF25Q93038 417 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 LARP6Q9BRS8 491 aaKnown RBP16.01■□□□□ 0.15
UFD1-209ENST00000489406 RUSC1Q9BVN2 902 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 TTLL2Q9BWV7 592 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 MAGEC2Q9UBF1 373 aaPredicted RBP16.01■□□□□ 0.15
UFD1-209ENST00000489406 DERAQ9Y315 318 aa16.01■□□□□ 0.15
UFD1-209ENST00000489406 CISD3P0C7P0 127 aa16■□□□□ 0.15
UFD1-209ENST00000489406 FAM87AP0C7U9 286 aa16■□□□□ 0.15
UFD1-209ENST00000489406 POU3F2P20265 443 aaPredicted RBP16■□□□□ 0.15
UFD1-209ENST00000489406 MUTP22033 750 aa16■□□□□ 0.15
UFD1-209ENST00000489406 BDNFP23560 247 aa16■□□□□ 0.15
UFD1-209ENST00000489406 KRT2P35908 639 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms