RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 BHMTQ93088 406 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 FAXDC2Q96IV6 333 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 NT5C1BQ96P26 610 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 RASAL2Q9UJF2 1139 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 GMEB2Q9UKD1 530 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 TSPAN16Q9UKR8 245 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 USP3Q9Y6I4 520 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 SPAG17Q6Q759 2223 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 SDK1Q7Z5N4 2213 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 PIK3R2O00459 728 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 GREM1O60565 184 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 KAT7O95251 611 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 TIE1P35590 1138 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 TKTL1P51854 596 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 PDE4CQ08493 712 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 SPEM2Q0P670 501 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 EFEMP1Q12805 493 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 TMEM270Q6UE05 265 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 TPGS1Q6ZTW0 290 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.74□□□□□ -0.05
VTI1A-206ENST00000489142 CREBRFQ8IUR6 639 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 ALLCQ8N6M5 410 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 KIAA1958Q8N8K9 716 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 ANKRD52Q8NB46 1076 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 LMO3Q8TAP4 145 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 TFAP2BQ92481 460 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 SECISBP2LQ93073 1101 aaKnown RBP14.74□□□□□ -0.05
VTI1A-206ENST00000489142 PNKPQ96T60 521 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 PARD6AQ9NPB6 346 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 ARHGEF4Q9NR80 690 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 SPHK2Q9NRA0 654 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 KIAA1468Q9P260 1216 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 DNMT3LQ9UJW3 386 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 USP18Q9UMW8 372 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 PCDHB4Q9Y5E5 795 aa14.74□□□□□ -0.05
VTI1A-206ENST00000489142 MYO18AQ92614 2054 aaKnown RBP14.73□□□□□ -0.05
VTI1A-206ENST00000489142 NEDD8-MDP1E9PL57 170 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 RNF225M0QZC1 329 aaPredicted RBP14.73□□□□□ -0.05
VTI1A-206ENST00000489142 RPP40O75818 363 aaKnown RBP14.73□□□□□ -0.05
VTI1A-206ENST00000489142 KLF8O95600 359 aaPredicted RBP14.73□□□□□ -0.05
VTI1A-206ENST00000489142 APODP05090 189 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 RALAP11233 206 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 TBXAS1P24557 533 aaPredicted RBP14.73□□□□□ -0.05
VTI1A-206ENST00000489142 BRD2P25440 801 aaKnown RBP14.73□□□□□ -0.05
VTI1A-206ENST00000489142 HOXA6P31267 233 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 ID4P47928 161 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 BCAT1P54687 386 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 YWHAEP62258 255 aaKnown RBP14.73□□□□□ -0.05
VTI1A-206ENST00000489142 GAD2Q05329 585 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 ADIGQ0VDE8 80 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 KCNH2Q12809 1159 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 RAB41Q5JT25 222 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 LAIR1Q6GTX8 287 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 HTR3DQ70Z44 454 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 SYT13Q7L8C5 426 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 TRIM59Q8IWR1 403 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 FAM160A2Q8N612 972 aaPredicted RBP14.73□□□□□ -0.05
VTI1A-206ENST00000489142 ACDQ96AP0 544 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 RMDN1Q96DB5 314 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 MED15Q96RN5 788 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 ZSWIM1Q9BR11 485 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 ULBP1Q9BZM6 244 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 LSM7Q9UK45 103 aaKnown RBP14.73□□□□□ -0.05
VTI1A-206ENST00000489142 INVSQ9Y283 1065 aa14.73□□□□□ -0.05
VTI1A-206ENST00000489142 O00370 1275 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 XPO1O14980 1071 aaKnown RBP14.72□□□□□ -0.05
VTI1A-206ENST00000489142 DCLK1O15075 740 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 AXIN1O15169 862 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 TULP3O75386 442 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 STC2O76061 302 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 AFPP02771 609 aaKnown RBP14.72□□□□□ -0.05
VTI1A-206ENST00000489142 CCDC192P0DO97 292 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 VDRP11473 427 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 HNRNPLP14866 589 aaKnown RBP eCLIP14.72□□□□□ -0.05
VTI1A-206ENST00000489142 RGS7P49802 495 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 SLC8A3P57103 927 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 YWHAGP61981 247 aaKnown RBP eCLIP14.72□□□□□ -0.05
VTI1A-206ENST00000489142 GOLGA8FQ08AF8 430 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 GOLGA8DPQ0D2H9 430 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 BST2Q10589 180 aaKnown RBP14.72□□□□□ -0.05
VTI1A-206ENST00000489142 CCDC6Q16204 474 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 BTBD8Q5XKL5 378 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 RSRC2Q7L4I2 434 aaKnown RBP14.72□□□□□ -0.05
VTI1A-206ENST00000489142 KBTBD6Q86V97 674 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 ETFBKMTQ8IXQ9 262 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 PHTF2Q8N3S3 785 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 TXNDC5Q8NBS9 432 aaKnown RBP14.72□□□□□ -0.05
VTI1A-206ENST00000489142 GAB3Q8WWW8 586 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 OTUB2Q96DC9 234 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 ERLEC1Q96DZ1 483 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 P2RY11Q96G91 374 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 TPSD1Q9BZJ3 242 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 INTS2Q9H0H0 1204 aaKnown RBP14.72□□□□□ -0.05
VTI1A-206ENST00000489142 PLK2Q9NYY3 685 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 HESX1Q9UBX0 185 aa14.72□□□□□ -0.05
VTI1A-206ENST00000489142 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.72□□□□□ -0.05
VTI1A-206ENST00000489142 M0QYV0 167 aa14.71□□□□□ -0.05
VTI1A-206ENST00000489142 HOXC11O43248 304 aaPredicted RBP14.71□□□□□ -0.05
VTI1A-206ENST00000489142 APBB3O95704 486 aa14.71□□□□□ -0.05
VTI1A-206ENST00000489142 ZBED1O96006 694 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms