RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 YARSP54577 528 aaKnown RBP13.19□□□□□ -0.3
CLIC4-202ENST00000488683 CCDC15Q0P6D6 951 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 CTU1Q7Z7A3 348 aaKnown RBP13.19□□□□□ -0.3
CLIC4-202ENST00000488683 PQLC3Q8N755 202 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 PLD5Q8N7P1 536 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 SHKBP1Q8TBC3 707 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 LENG1Q96BZ8 264 aaPredicted RBP13.19□□□□□ -0.3
CLIC4-202ENST00000488683 MANSC1Q9H8J5 431 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 CYLDQ9NQC7 956 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 DPP3Q9NY33 737 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 SNTG2Q9NY99 539 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 USH1CQ9Y6N9 552 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 HTTP42858 3142 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 C2CD4BA6NLJ0 364 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 TRIM49D1C9J1S8 452 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 PRPSAP2O60256 369 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 ENDOD1O94919 500 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 PHBP35232 272 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 ZNF143P52747 638 aaPredicted RBP13.19□□□□□ -0.3
CLIC4-202ENST00000488683 PITX1P78337 314 aaPredicted RBP13.19□□□□□ -0.3
CLIC4-202ENST00000488683 TMEM132DQ14C87 1099 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 NOMO1Q15155 1222 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 MROH9Q5TGP6 573 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 SPNS2Q8IVW8 549 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 MYCBPQ99417 103 aaPredicted RBP13.19□□□□□ -0.3
CLIC4-202ENST00000488683 SNRNP25Q9BV90 132 aaKnown RBP13.19□□□□□ -0.3
CLIC4-202ENST00000488683 EIF2AQ9BY44 585 aaKnown RBP13.19□□□□□ -0.3
CLIC4-202ENST00000488683 USP29Q9HBJ7 922 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 LGALS2P05162 132 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 ADORA2AP29274 412 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 YWHAZP63104 245 aaKnown RBP13.19□□□□□ -0.3
CLIC4-202ENST00000488683 TLDC1Q6P9B6 456 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 CES3Q6UWW8 571 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 C20orf27Q9GZN8 174 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 ACSS2Q9NR19 701 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 PRMT7Q9NVM4 692 aaPredicted RBP13.19□□□□□ -0.3
CLIC4-202ENST00000488683 C15orf41Q9Y2V0 281 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 CSH1P0DML2 217 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 CSH2P0DML3 217 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 LMO2P25791 158 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 GTF2A2P52657 109 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 KCNJ11Q14654 390 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 CAND1Q86VP6 1230 aaKnown RBP13.18□□□□□ -0.3
CLIC4-202ENST00000488683 ARMC2Q8NEN0 867 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 FRMD8P1Q9BZ68 369 aaPredicted RBP13.18□□□□□ -0.3
CLIC4-202ENST00000488683 DHX35Q9H5Z1 703 aaKnown RBP13.18□□□□□ -0.3
CLIC4-202ENST00000488683 ZNF408Q9H9D4 720 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 RSAD1Q9HA92 442 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 TEX264Q9Y6I9 313 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 ZWINTO95229 277 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 INHBAP08476 426 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 VDRP11473 427 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 PCK1P35558 622 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 PGGT1BP53609 377 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 ZNF200P98182 395 aaPredicted RBP13.18□□□□□ -0.3
CLIC4-202ENST00000488683 ARHGAP1Q07960 439 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 KLHL38Q2WGJ6 581 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 C16orf46Q6P387 395 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 DSTYKQ6XUX3 929 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 ARMCX2Q7L311 632 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 EXOC8Q8IYI6 725 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 HACE1Q8IYU2 909 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 KHSRPQ92945 711 aaKnown RBP eCLIP13.18□□□□□ -0.32e-6■□□□□ 8.4
CLIC4-202ENST00000488683 RNF157Q96PX1 679 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 TMEM120AQ9BXJ8 343 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 PHACTR1Q9C0D0 580 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 ASNSD1Q9NWL6 643 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 FETUBQ9UGM5 382 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 IKBKGQ9Y6K9 419 aa13.18□□□□□ -0.3
CLIC4-202ENST00000488683 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.17□□□□□ -0.3
CLIC4-202ENST00000488683 PAPSS1O43252 624 aaPredicted RBP13.17□□□□□ -0.3
CLIC4-202ENST00000488683 SLC25A27O95847 323 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 MCF2P10911 925 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 SKIV2L2P42285 1042 aaKnown RBP13.17□□□□□ -0.3
CLIC4-202ENST00000488683 ABCG1P45844 678 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 BCAR1P56945 870 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 CLNKQ7Z7G1 428 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 CCDC185Q8N715 623 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 LINC01465Q8N7H1 131 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 OR6B3Q8NGW1 331 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 OPTNQ96CV9 577 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 CNPY3Q9BT09 278 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 TSSK1BQ9BXA7 367 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 DENND2DQ9H6A0 471 aaPredicted RBP13.17□□□□□ -0.3
CLIC4-202ENST00000488683 YY1AP1Q9H869 796 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 VRTNQ9H8Y1 702 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 PPCSQ9HAB8 311 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 EBF2Q9HAK2 575 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 KCNK13Q9HB14 408 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 PCDH18Q9HCL0 1135 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 SSU72Q9NP77 194 aaKnown RBP13.17□□□□□ -0.3
CLIC4-202ENST00000488683 PCMTD2Q9NV79 361 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 SETD4Q9NVD3 440 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 ERAP1Q9NZ08 941 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 BARX2Q9UMQ3 279 aaPredicted RBP13.17□□□□□ -0.3
CLIC4-202ENST00000488683 TTLL3Q9Y4R7 772 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 PLXNA1Q9UIW2 1896 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 ZBED1O96006 694 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 C1QAP02745 245 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms