RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 CCSER2Q9H7U1 834 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 CAPN10Q9HC96 672 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 CD248Q9HCU0 757 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 SPHK2Q9NRA0 654 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 KBTBD4Q9NVX7 518 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 CALCOCO1Q9P1Z2 691 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 CHORDC1Q9UHD1 332 aaPredicted RBP12.05□□□□□ -0.48
SNU13-208ENST00000488571 NEUROG3Q9Y4Z2 214 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 ATRXP46100 2492 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 A0A1W2PQF6 199 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 FAM92AA1XBS5 289 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 TBC1D3BA6NDS4 549 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 CLIC2O15247 247 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 GREM1O60565 184 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 RTN3O95197 1032 aaPredicted RBP12.04□□□□□ -0.48
SNU13-208ENST00000488571 CFIP05156 583 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 DPP6P42658 865 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 PGFP49763 221 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 CYP2J2P51589 502 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 SLC5A3P53794 718 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 FAM193AP78312 1265 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 RPL6Q02878 288 aaKnown RBP12.04□□□□□ -0.48
SNU13-208ENST00000488571 C10orf76Q5T2E6 689 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 HECTD3Q5T447 861 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 PACS2Q86VP3 889 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 TMEM25Q86YD3 366 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 SLC41A1Q8IVJ1 513 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 PGBD3Q8N328 593 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 DEFB119Q8N690 84 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 TERB1Q8NA31 727 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 PLEKHO2Q8TD55 490 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 ZCCHC14Q8WYQ9 949 aaKnown RBP12.04□□□□□ -0.48
SNU13-208ENST00000488571 CCDC127Q96BQ5 260 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 SMYD3Q9H7B4 428 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 SLC6A14Q9UN76 642 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 MSRB2Q9Y3D2 182 aa12.04□□□□□ -0.48
SNU13-208ENST00000488571 IGHV1OR15-9A0A0B4J2B8 117 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 AP5Z1O43299 807 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 SERPINF2P08697 491 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 HOXB2P14652 356 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 NTSR1P30989 418 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 WASP42768 502 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 NASPP49321 788 aaPredicted RBP12.03□□□□□ -0.48
SNU13-208ENST00000488571 TUBP50607 506 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 CDH8P55286 799 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 SIM1P81133 766 aaPredicted RBP12.03□□□□□ -0.48
SNU13-208ENST00000488571 ZNF33AQ06730 810 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 EHHADHQ08426 723 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 COL9A2Q14055 689 aaPredicted RBP12.03□□□□□ -0.48
SNU13-208ENST00000488571 DUOXA1Q1HG43 343 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 FAM26FQ5R3K3 315 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 BTBD8Q5XKL5 378 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 EGFLAMQ63HQ2 1017 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 CNNM4Q6P4Q7 775 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 FAM35AQ86V20 835 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 XXYLT1Q8NBI6 393 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 ZMIZ2Q8NF64 920 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 OR2I1PQ8NGU4 316 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 SCFD1Q8WVM8 642 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 ELMO3Q96BJ8 720 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 ACOX2Q99424 681 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 SDCBP2Q9H190 292 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 VRTNQ9H8Y1 702 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 DMAP1Q9NPF5 467 aaPredicted RBP12.03□□□□□ -0.48
SNU13-208ENST00000488571 GMIPQ9P107 970 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 DEC1Q9P2X7 70 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 NXF1Q9UBU9 619 aaKnown RBP12.03□□□□□ -0.48
SNU13-208ENST00000488571 MTMR6Q9Y217 621 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 SH3BP1Q9Y3L3 701 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 STARD13Q9Y3M8 1113 aa12.03□□□□□ -0.48
SNU13-208ENST00000488571 FREM2Q5SZK8 3169 aa12.02□□□□□ -0.48
SNU13-208ENST00000488571 PRRT4C9JH25 899 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 BEST1O76090 585 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 CAPNS1P04632 268 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 CD59P13987 128 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 NDUFV2P19404 249 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 ATICP31939 592 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 CASP4P49662 377 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 ASIC1P78348 528 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 GFPT1Q06210 699 aaPredicted RBP12.02□□□□□ -0.49
SNU13-208ENST00000488571 TRPC3Q13507 836 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 ANO4Q32M45 955 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 SLC36A4Q6YBV0 504 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 HTR3DQ70Z44 454 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 TRMT11Q7Z4G4 463 aaKnown RBP12.02□□□□□ -0.49
SNU13-208ENST00000488571 NELFCDQ8IXH7 590 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 FUKQ8N0W3 1084 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 MINDY1Q8N5J2 469 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 LINC00301Q8NCQ3 95 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 CEP76Q8TAP6 659 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 SYAP1Q96A49 352 aaPredicted RBP12.02□□□□□ -0.49
SNU13-208ENST00000488571 ERLEC1Q96DZ1 483 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 SMOQ99835 787 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 GTPBP2Q9BX10 602 aaKnown RBP12.02□□□□□ -0.49
SNU13-208ENST00000488571 LRRC27Q9C0I9 530 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 CD93Q9NPY3 652 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 UBE4BO95155 1302 aa12.02□□□□□ -0.49
SNU13-208ENST00000488571 FAM221BA6H8Z2 402 aa12.01□□□□□ -0.49
SNU13-208ENST00000488571 TAF4O00268 1085 aa12.01□□□□□ -0.49
SNU13-208ENST00000488571 CACNG3O60359 315 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms