RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 PCDHB1Q9Y5F3 818 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 CKAP5Q14008 2032 aa12.48□□□□□ -0.41
TRIM56-204ENST00000487252 POLQO75417 2590 aa12.47□□□□□ -0.41
TRIM56-204ENST00000487252 CLDN3O15551 220 aa12.47□□□□□ -0.41
TRIM56-204ENST00000487252 MPOP05164 745 aa12.47□□□□□ -0.41
TRIM56-204ENST00000487252 CPA1P15085 419 aa12.47□□□□□ -0.41
TRIM56-204ENST00000487252 TSPY1Q01534 308 aa12.47□□□□□ -0.41
TRIM56-204ENST00000487252 KRT32Q14532 448 aa12.47□□□□□ -0.41
TRIM56-204ENST00000487252 PDIA5Q14554 519 aa12.47□□□□□ -0.41
TRIM56-204ENST00000487252 DDX42Q86XP3 938 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRIM56-204ENST00000487252 TMEM25Q86YD3 366 aa12.47□□□□□ -0.41
TRIM56-204ENST00000487252 FAM26EQ8N5C1 309 aa12.47□□□□□ -0.41
TRIM56-204ENST00000487252 CEP295NLQ96MC4 621 aa12.47□□□□□ -0.41
TRIM56-204ENST00000487252 ELF4Q99607 663 aaPredicted RBP12.47□□□□□ -0.41
TRIM56-204ENST00000487252 ACBD6Q9BR61 282 aa12.47□□□□□ -0.41
TRIM56-204ENST00000487252 PYM1Q9BRP8 204 aaKnown RBP12.47□□□□□ -0.41
TRIM56-204ENST00000487252 C6orf106Q9H6K1 298 aaPredicted RBP12.47□□□□□ -0.41
TRIM56-204ENST00000487252 ANO2Q9NQ90 1003 aa12.47□□□□□ -0.41
TRIM56-204ENST00000487252 SPHK2Q9NRA0 654 aa12.47□□□□□ -0.41
TRIM56-204ENST00000487252 SMPD4Q9NXE4 827 aa12.47□□□□□ -0.41
TRIM56-204ENST00000487252 CELSR2Q9HCU4 2923 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 K7ELQ4 463 aaPredicted RBP12.46□□□□□ -0.41
TRIM56-204ENST00000487252 CACNG3O60359 315 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 TSPAN3O60637 253 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 CD2BP2O95400 341 aaKnown RBP12.46□□□□□ -0.41
TRIM56-204ENST00000487252 MT-CO3P00414 261 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 CKMT2P17540 419 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 ACP1P24666 158 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 MAGEA11P43364 429 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 PPP3CCP48454 512 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 USP46P62068 366 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 GABREP78334 506 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 CCT2P78371 535 aaKnown RBP12.46□□□□□ -0.41
TRIM56-204ENST00000487252 GRIN1Q05586 938 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 SFMBT2Q5VUG0 894 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 CDCP2Q5VXM1 449 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 HIST2H2BCQ6DN03 193 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 GRAMD4Q6IC98 578 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 JADE1Q6IE81 842 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 KDM7AQ6ZMT4 941 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 CCDC81Q6ZN84 652 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 TMPRSS6Q8IU80 811 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 EID2Q8N6I1 236 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 FUBP3Q96I24 572 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRIM56-204ENST00000487252 VCPIP1Q96JH7 1222 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 SPATA17Q96L03 361 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 TTLL2Q9BWV7 592 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 KMT5AQ9NQR1 393 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 TRPM5Q9NZQ8 1165 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 LRWD1Q9UFC0 647 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 STON1Q9Y6Q2 735 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 MYH10P35580 1976 aa12.46□□□□□ -0.41
TRIM56-204ENST00000487252 BLACEA4D250 179 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 WNT7AO00755 349 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 VILLO15195 856 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 ITGB2P05107 769 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 MUTP22033 750 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 CD27P26842 260 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 TAF6P49848 677 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 COPAP53621 1224 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 ASIC1P78348 528 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 FOXK1P85037 733 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 INTS6LQ5JSJ4 861 aaKnown RBP12.45□□□□□ -0.42
TRIM56-204ENST00000487252 KANSL1Q7Z3B3 1105 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 TNFRSF25Q93038 417 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 BIRC7Q96CA5 298 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 SIPA1Q96FS4 1042 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 MMS19Q96T76 1030 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 POLR1BQ9H9Y6 1135 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 C17orf75Q9HAS0 396 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 THSD1Q9NS62 852 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 DERAQ9Y315 318 aa12.45□□□□□ -0.42
TRIM56-204ENST00000487252 PLXNA2O75051 1894 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 SETD2Q9BYW2 2564 aaPredicted RBP12.44□□□□□ -0.42
TRIM56-204ENST00000487252 YKT6O15498 198 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 EFSO43281 561 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 ITGAVP06756 1048 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 CISD3P0C7P0 127 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 SFTPCP11686 197 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 ACO1P21399 889 aaKnown RBP12.44□□□□□ -0.42
TRIM56-204ENST00000487252 ACSL1P33121 698 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 E2F1Q01094 437 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 ST3GAL1Q11201 340 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 MAPK7Q13164 816 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 STARD3Q14849 445 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 KYAT1Q16773 422 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 CCDC142Q17RM4 750 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 ANO4Q32M45 955 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 PRAMEF14Q5SWL7 426 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 BBS7Q8IWZ6 715 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 CD302Q8IX05 232 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 SCFD1Q8WVM8 642 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 SNX19Q92543 992 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 PRCCQ92733 491 aaPredicted RBP12.44□□□□□ -0.42
TRIM56-204ENST00000487252 BHMT2Q9H2M3 363 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 DNAJC17Q9NVM6 304 aaKnown RBP12.44□□□□□ -0.42
TRIM56-204ENST00000487252 GTF3C4Q9UKN8 822 aa12.44□□□□□ -0.42
TRIM56-204ENST00000487252 CRYBG3Q68DQ2 2970 aa12.43□□□□□ -0.42
TRIM56-204ENST00000487252 OTOGQ6ZRI0 2925 aa12.43□□□□□ -0.42
TRIM56-204ENST00000487252 KPNA7A9QM74 516 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms