RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 SPATA3Q8NHX4 192 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 C18orf8Q96DM3 657 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 CXorf36Q9H7Y0 433 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 INTS13Q9NVM9 706 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 SERGEFQ9UGK8 458 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 NDRG4Q9ULP0 352 aaKnown RBP4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 MRPS17Q9Y2R5 130 aaKnown RBP4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 MORC2Q9Y6X9 1032 aaPredicted RBP4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 CYSRT1A8MQ03 144 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 RGS10O43665 173 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 ORC4O43929 436 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 PIP5K1CO60331 668 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 CBSLP0DN79 551 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 MPGP29372 298 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 PDIA3P30101 505 aaKnown RBP4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 CBSP35520 551 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 ITGA8P53708 1063 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 RAB30Q15771 203 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 PFKFB4Q16877 469 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 ZACNQ401N2 412 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 C4orf46Q504U0 113 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 ICE2Q659A1 982 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 RGS7BPQ6MZT1 257 aaPredicted RBP4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 GGT6Q6P531 493 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 MZT2AQ6P582 158 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 TLDC1Q6P9B6 456 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 CRTC1Q6UUV9 634 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 KIAA0408Q6ZU52 694 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 SLC15A3Q8IY34 581 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 SPARTQ8N0X7 666 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 FAM109AQ8N4B1 249 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 TOR1AIP2Q8NFQ8 470 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 CCT6BQ92526 530 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 PPP2R3CQ969Q6 453 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 HAPLN3Q96S86 360 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 SH2D3AQ9BRG2 576 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 AS3MTQ9HBK9 375 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 AGO4Q9HCK5 861 aaKnown RBP4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 OBP2BQ9NPH6 170 aa4.17□□□□□ -1.74
SNRNP27-204ENST00000487029 NPC1O15118 1278 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 CD3EAPO15446 510 aaKnown RBP4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 SRGAP2O75044 1071 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 CSF1RP07333 972 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 EGR1P18146 543 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 EPHB2P29323 1055 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 ATICP31939 592 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 CCT4P50991 539 aaKnown RBP4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 PDE6CP51160 858 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 HNRNPMP52272 730 aaKnown RBP eCLIP4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 GALNT1Q10472 559 aaPredicted RBP4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 RAPGEF1Q13905 1077 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 KCNAB1Q14722 419 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 PTPRRQ15256 657 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 MAPKAPK3Q16644 382 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 NBPF8Q3BBV2 869 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 SUPT20HL1Q3ZLR7 823 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 FAXCQ5TGI0 409 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 VPS53Q5VIR6 699 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 MORN5Q5VZ52 161 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 ARL6IP4Q66PJ3 421 aaKnown RBP4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 MRNIPQ6NTE8 343 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 USP49Q70CQ1 688 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 YTHDF3Q7Z739 585 aaKnown RBP4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 NEK8Q86SG6 692 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 CCDC28AQ8IWP9 274 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 MYCT1Q8N699 235 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 SPATA5Q8NB90 893 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 DNAJB14Q8TBM8 379 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 MYCBPAPQ8TBZ2 947 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 IPO4Q8TEX9 1081 aaKnown RBP4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 FAM136AQ96C01 138 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 LTV1Q96GA3 475 aaPredicted RBP4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 ZNF668Q96K58 619 aaPredicted RBP4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 RMDN3Q96TC7 470 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 QTRT1Q9BXR0 403 aaKnown RBP4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 TRIM5Q9C035 493 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 SPRTNQ9H040 489 aaPredicted RBP4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 PCDHAC1Q9H158 963 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 ZBTB26Q9HCK0 441 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 TMEM8AQ9HCN3 771 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 ZMYND8Q9ULU4 1186 aaPredicted RBP4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 HPSEQ9Y251 543 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 SSX2IPQ9Y2D8 614 aa4.16□□□□□ -1.74
SNRNP27-204ENST00000487029 WDR27A2RRH5 827 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 LGALS16A8MUM7 142 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 SYT5O00445 386 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 COQ9O75208 318 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 SFPQP23246 707 aaKnown RBP eCLIP4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 CCNIQ14094 377 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 PTK2BQ14289 1009 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 SPARCL1Q14515 664 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 SLC5A9Q2M3M2 681 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 PTCHD3Q3KNS1 767 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 TMEM95Q3KNT9 176 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 CERCAMQ5T4B2 595 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 MANEALQ5VSG8 457 aa4.15□□□□□ -1.75
SNRNP27-204ENST00000487029 RAP1GAP2Q684P5 730 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms