RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 TOM1L1O75674 476 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 GAS8O95995 478 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 GSTA1P08263 222 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 MCF2P10911 925 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 RWDD2BP57060 319 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 MAGOHP61326 146 aaKnown RBP9.47□□□□□ -0.89
COL12A1-208ENST00000486533 POU5F1Q01860 360 aaKnown RBP9.47□□□□□ -0.89
COL12A1-208ENST00000486533 ITIH4Q14624 930 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 UAP1Q16222 522 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-208ENST00000486533 CYP1B1Q16678 543 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 UPP1Q16831 310 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 ARHGAP44Q17R89 818 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 SKIDA1Q1XH10 827 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 LIN9Q5TKA1 542 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 TTC19Q6DKK2 380 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-208ENST00000486533 DCLRE1AQ6PJP8 1040 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 ZNF677Q86XU0 584 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 C12orf50Q8NA57 414 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-208ENST00000486533 TMEM161BQ8NDZ6 487 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 MAGOHBQ96A72 148 aaKnown RBP9.47□□□□□ -0.89
COL12A1-208ENST00000486533 ZNF707Q96C28 371 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-208ENST00000486533 CHMP6Q96FZ7 201 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 BICD1Q96G01 975 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 ZBTB45Q96K62 511 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-208ENST00000486533 CCDC114Q96M63 670 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 NT5C1BQ96P26 610 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 CLSTN3Q9BQT9 956 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 NTPCRQ9BSD7 190 aaKnown RBP9.47□□□□□ -0.89
COL12A1-208ENST00000486533 STRA6Q9BX79 667 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 FOXP3Q9BZS1 431 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 WDR6Q9NNW5 1121 aaKnown RBP9.47□□□□□ -0.89
COL12A1-208ENST00000486533 UBE2TQ9NPD8 197 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-208ENST00000486533 PPANQ9NQ55 473 aaKnown RBP9.47□□□□□ -0.89
COL12A1-208ENST00000486533 SLC38A7Q9NVC3 462 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 ZDHHC7Q9NXF8 308 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 ATP8A1Q9Y2Q0 1164 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 USP34Q70CQ2 3546 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 KMT2EQ8IZD2 1858 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 I3L4J1 428 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 CLDN3O15551 220 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 ECEL1O95672 775 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 C1RP00736 705 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 PDGFBP01127 241 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-208ENST00000486533 FTLP02792 175 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-208ENST00000486533 TRIM49P0CI25 452 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 TRIM49CP0CI26 452 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 RARGP13631 454 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 PROZP22891 400 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 IGFBP6P24592 240 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-208ENST00000486533 TKTP29401 623 aaKnown RBP9.46□□□□□ -0.89
COL12A1-208ENST00000486533 SLC1A1P43005 524 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 MNAT1P51948 309 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 VCPP55072 806 aaKnown RBP9.46□□□□□ -0.89
COL12A1-208ENST00000486533 MCCD1P59942 119 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-208ENST00000486533 NHLH1Q02575 133 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 LMNB2Q03252 620 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 SOX4Q06945 474 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-208ENST00000486533 CBWD6Q4V339 395 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 SEZ6Q53EL9 994 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 ZC2HC1CQ53FD0 456 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-208ENST00000486533 CBWD3Q5JTY5 395 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 CBWD5Q5RIA9 395 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 KRT39Q6A163 491 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 GJB7Q6PEY0 223 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 LILRA6Q6PI73 481 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 NUDT18Q6ZVK8 323 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 GET4Q7L5D6 327 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-208ENST00000486533 CCDC197Q8NCU1 140 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 C3orf58Q8NDZ4 430 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 SLCO2A1Q92959 643 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 ZBTB9Q96C00 473 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 SNX27Q96L92 541 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 XPO6Q96QU8 1125 aaKnown RBP9.46□□□□□ -0.89
COL12A1-208ENST00000486533 RHOBTB2Q9BYZ6 727 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 TXLNGYQ9BZA5 131 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 PRKD2Q9BZL6 878 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 THAP2Q9H0W7 228 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 KDM4CQ9H3R0 1056 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 MFSD1Q9H3U5 465 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 KCNK12Q9HB15 430 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 KIAA1586Q9HCI6 787 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 OSGEPQ9NPF4 335 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 WHRNQ9P202 907 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 FBXW11Q9UKB1 542 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 AJAP1Q9UKB5 411 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-208ENST00000486533 POLIQ9UNA4 740 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 ALG6Q9Y672 507 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 VPS13AQ96RL7 3174 aa9.46□□□□□ -0.89
COL12A1-208ENST00000486533 CACNA1HO95180 2353 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 DOCK8Q8NF50 2099 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 TMEM189-UBE2V1I3L0A0 370 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 ABLIM1O14639 778 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 CHUKO15111 745 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 ADAM12O43184 909 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 CYP1A2P05177 515 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 C8AP07357 584 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 FGFR3P22607 806 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 OR1D2P34982 312 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 BRCC3P46736 316 aa9.46□□□□□ -0.9
COL12A1-208ENST00000486533 NCKAP1LP55160 1127 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms