RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 PDE4CQ08493 712 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 SMARCB1Q12824 385 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 TBX2Q13207 712 aaPredicted RBP5.94□□□□□ -1.46
COPS3-208ENST00000486032 VEPH1Q14D04 833 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 CNGA2Q16280 664 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 C2CD6Q53TS8 623 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 NAA35Q5VZE5 725 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 TPGS2Q68CL5 300 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 ARHGAP17Q68EM7 881 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 LILRA6Q6PI73 481 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 ELMSAN1Q6PJG2 1045 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 CLEC20AQ6ZU45 233 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 CCDC149Q6ZUS6 474 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 PAQR9Q6ZVX9 377 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 CCDC186Q7Z3E2 898 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.94□□□□□ -1.46
COPS3-208ENST00000486032 TTC30AQ86WT1 665 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 CNGA4Q8IV77 575 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 GPR65Q8IYL9 337 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 FUKQ8N0W3 1084 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 ELMOD1Q8N336 334 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 OR8K1Q8NGG5 319 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 ADAM32Q8TC27 787 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 C2orf15Q8WU43 125 aaKnown RBP5.94□□□□□ -1.46
COPS3-208ENST00000486032 IQCDQ96DY2 449 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 SMARCD1Q96GM5 515 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 ZNF512Q96ME7 567 aaPredicted RBP5.94□□□□□ -1.46
COPS3-208ENST00000486032 CDCA3Q99618 268 aaPredicted RBP5.94□□□□□ -1.46
COPS3-208ENST00000486032 PKMYT1Q99640 499 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 HNRNPABQ99729 332 aaKnown RBP5.94□□□□□ -1.46
COPS3-208ENST00000486032 SMOQ99835 787 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 AGPAT1Q99943 283 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 CORO1BQ9BR76 489 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 EDEM3Q9BZQ6 932 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 MIS12Q9H081 205 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 SYNCQ9H7C4 482 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 LRRC4Q9HBW1 653 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 DMAP1Q9NPF5 467 aaPredicted RBP5.94□□□□□ -1.46
COPS3-208ENST00000486032 ABHD10Q9NUJ1 306 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 FBXW11Q9UKB1 542 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 KIAA1257Q9ULG3 409 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.94□□□□□ -1.46
COPS3-208ENST00000486032 CNTN6Q9UQ52 1028 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 CEP83Q9Y592 693 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 MUC3AQ02505 3323 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 H3BQ06 376 aaPredicted RBP5.93□□□□□ -1.46
COPS3-208ENST00000486032 TRIM66O15016 1216 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 AKR1B10O60218 316 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 BNIP3LO60238 219 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 ZMYND10O75800 440 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 SERPING1P05155 500 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 GJA1P17302 382 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 ATF6P18850 670 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 POU3F3P20264 500 aaPredicted RBP5.93□□□□□ -1.46
COPS3-208ENST00000486032 KCNA5P22460 613 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 SP100P23497 879 aaPredicted RBP5.93□□□□□ -1.46
COPS3-208ENST00000486032 EIF4A3P38919 411 aaKnown RBP5.93□□□□□ -1.46
COPS3-208ENST00000486032 SLC5A3P53794 718 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 BCAT1P54687 386 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 EPHB3P54753 998 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 NTHL1P78549 312 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 FMO1Q01740 532 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 CDR2Q01850 454 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 BST2Q10589 180 aaKnown RBP5.93□□□□□ -1.46
COPS3-208ENST00000486032 ADAM15Q13444 863 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 STILQ15468 1287 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 CFAP221Q4G0U5 840 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 EFHC2Q5JST6 749 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 CYP4A22Q5TCH4 519 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 OR6B2Q6IFH4 312 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 ANKRD54Q6NXT1 300 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 LCLAT1Q6UWP7 414 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 VSTM1Q6UX27 236 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 DENND5BQ6ZUT9 1274 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 GPRIN1Q7Z2K8 1008 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 ZNF571Q7Z3V5 609 aaPredicted RBP5.93□□□□□ -1.46
COPS3-208ENST00000486032 IRF2BP2Q7Z5L9 587 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 GRASPQ7Z6J2 395 aaPredicted RBP5.93□□□□□ -1.46
COPS3-208ENST00000486032 PIGZQ86VD9 579 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 FMNL3Q8IVF7 1028 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.93□□□□□ -1.46
COPS3-208ENST00000486032 TCEAL8Q8IYN2 117 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 NUP93Q8N1F7 819 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 EFHBQ8N7U6 833 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 TC2NQ8N9U0 490 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 ANKRD52Q8NB46 1076 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 TMEM35BQ8NCS4 154 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 TTC16Q8NEE8 873 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 ZMIZ2Q8NF64 920 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 SCAMP5Q8TAC9 235 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 SLC30A5Q8TAD4 765 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 EPS8L1Q8TE68 723 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 CPA5Q8WXQ8 436 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 SMG7Q92540 1137 aaKnown RBP5.93□□□□□ -1.46
COPS3-208ENST00000486032 NDRG1Q92597 394 aaKnown RBP5.93□□□□□ -1.46
COPS3-208ENST00000486032 FUBP3Q96I24 572 aaKnown RBP eCLIP5.93□□□□□ -1.46
COPS3-208ENST00000486032 PCDHB18PQ96TA0 734 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 CHP1Q99653 195 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 C11orf70Q9BRQ4 267 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 DUSP16Q9BY84 665 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms