RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, human

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM3-213	ENST00000485962	USP18	Q9UMW8	372 aa		12.83	□□□□□ -0.36
SGSM3-213	ENST00000485962	SSX2IP	Q9Y2D8	614 aa		12.83	□□□□□ -0.36
SGSM3-213	ENST00000485962	MGAM	O43451	1857 aa		12.83	□□□□□ -0.36
SGSM3-213	ENST00000485962	IGKV6D-21	A0A0A0MT36	114 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	KBTBD13	C9JR72	458 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	APOC4-APOC2	K7ER74	178 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	HAUS5	O94927	633 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	APOC2	P02655	101 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	GM2A	P17900	193 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	GCLC	P48506	637 aa	Predicted RBP	12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	ARFIP2	P53365	341 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	ROR1	Q01973	937 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	IGDCC3	Q8IVU1	814 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	CTAGE3P	Q8IX95	158 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	LSM14A	Q8ND56	463 aa	Known RBP	12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	CFAP36	Q96G28	342 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	C12orf42	Q96LP6	360 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	DHRS4	Q9BTZ2	278 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	VPS11	Q9H270	941 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	WDR37	Q9Y2I8	494 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	AFG3L2	Q9Y4W6	797 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	TCRBV9S1A1T	A0A576	114 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962		E7ESA3	106 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962		H7C0C1	242 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962		M0QYV0	167 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	GJB1	P08034	283 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	CXCL8	P10145	99 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	ATP5O	P48047	213 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	CDH6	P55285	790 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	ZNF200	P98182	395 aa	Predicted RBP	12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	CDO1	Q16878	200 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	FAM102A	Q5T9C2	384 aa	Predicted RBP	12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	IER5	Q5VY09	327 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	XYLT1	Q86Y38	959 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	FNIP1	Q8TF40	1166 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	MZB1	Q8WU39	189 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	SEPT1	Q8WYJ6	367 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	FAF2	Q96CS3	445 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	NAF1	Q96HR8	494 aa	Known RBP	12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	ADPGK	Q9BRR6	497 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	LHX5	Q9H2C1	402 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	ZMAT5	Q9UDW3	170 aa	Known RBP	12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	NUMBL	Q9Y6R0	609 aa		12.82	□□□□□ -0.36
SGSM3-213	ENST00000485962	AVIL	O75366	819 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	TPBGL	P0DKB5	382 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	FAAP100	Q0VG06	881 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	LY6K	Q17RY6	165 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	ATF7IP2	Q5U623	682 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	C1orf228	Q6PIY5	440 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	MPZL3	Q6UWV2	235 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	ZNF398	Q8TD17	642 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	SERAC1	Q96JX3	654 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	DENND2D	Q9H6A0	471 aa	Predicted RBP	12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	GALNT8	Q9NY28	637 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	WDR35	Q9P2L0	1181 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	B4GALT5	O43286	388 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	ITGBL1	O95965	494 aa	Predicted RBP	12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	BGN	P21810	368 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	SERPINB3	P29508	390 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	PCK1	P35558	622 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	CUL3	Q13618	768 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	MXD4	Q14582	209 aa	Predicted RBP	12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	SMYD3	Q9H7B4	428 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	RPF1	Q9H9Y2	349 aa	Known RBP	12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	RSAD1	Q9HA92	442 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	PREB	Q9HCU5	417 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	SAR1A	Q9NR31	198 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	FBXO6	Q9NRD1	293 aa	Predicted RBP	12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	HMGXB4	Q9UGU5	601 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	C2orf71	A6NGG8	1288 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	LUC7L3	O95232	432 aa	Known RBP	12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	TRUB2	O95900	331 aa	Known RBP	12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	GNAZ	P19086	355 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	CLPP	Q16740	277 aa	Predicted RBP	12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	PPM1N	Q8N819	430 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	APOPT1	Q96IL0	206 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	TWNK	Q96RR1	684 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	LBHD1	Q9BQE6	289 aa	Predicted RBP	12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	TMEM120A	Q9BXJ8	343 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	KANSL3	Q9P2N6	904 aa		12.81	□□□□□ -0.36
SGSM3-213	ENST00000485962	EVPL	Q92817	2033 aa		12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	NOP56	O00567	594 aa	Known RBP	12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	CCDC22	O60826	627 aa		12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	MICAL2	O94851	1124 aa		12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	DES	P17661	470 aa		12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	PTPN11	Q06124	597 aa	Predicted RBP	12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	CCDC6	Q16204	474 aa		12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	WASHC2D	Q5SRD0	308 aa		12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	SH3PXD2A	Q5TCZ1	1133 aa		12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	FAXC	Q5TGI0	409 aa		12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	ANGEL2	Q5VTE6	544 aa	Known RBP	12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	EEF1DP3	Q658K8	133 aa		12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	RFWD3	Q6PCD5	774 aa		12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	TMEM192	Q8IY95	271 aa		12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	ZNF276	Q8N554	614 aa		12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	CHST13	Q8NET6	341 aa		12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	UBA3	Q8TBC4	463 aa		12.8	□□□□□ -0.36
SGSM3-213	ENST00000485962	TRAPPC12	Q8WVT3	735 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms