RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 CXCL12P48061 93 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 MFAP3P55082 362 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 YWHAGP61981 247 aaKnown RBP eCLIP19.35■□□□□ 0.69
COL1A1-206ENST00000485870 GOLGA8FQ08AF8 430 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 GOLGA8DPQ0D2H9 430 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 ADIGQ0VDE8 80 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 CNGA2Q16280 664 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 PKDCCQ504Y2 493 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 RHBDF2Q6PJF5 856 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 ASCL5Q7RTU5 278 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 TADA2BQ86TJ2 420 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 MIB1Q86YT6 1006 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 ARHGAP18Q8N392 663 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 SYNPOQ8N3V7 929 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 SECISBP2LQ93073 1101 aaKnown RBP19.35■□□□□ 0.69
COL1A1-206ENST00000485870 SAMSN1Q9NSI8 373 aaKnown RBP19.35■□□□□ 0.69
COL1A1-206ENST00000485870 C2orf42Q9NWW7 574 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 CLIC5Q9NZA1 410 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 RASAL2Q9UJF2 1139 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 GTPBP10A4D1E9 387 aaKnown RBP19.34■□□□□ 0.69
COL1A1-206ENST00000485870 RNF40O75150 1001 aa19.34■□□□□ 0.69
COL1A1-206ENST00000485870 ADH1CP00326 375 aa19.34■□□□□ 0.69
COL1A1-206ENST00000485870 ADH5P11766 374 aa19.34■□□□□ 0.69
COL1A1-206ENST00000485870 OPRD1P41143 372 aa19.34■□□□□ 0.69
COL1A1-206ENST00000485870 RGS7P49802 495 aa19.34■□□□□ 0.69
COL1A1-206ENST00000485870 PPP2R5DQ14738 602 aa19.34■□□□□ 0.69
COL1A1-206ENST00000485870 STILQ15468 1287 aa19.34■□□□□ 0.69
COL1A1-206ENST00000485870 ARHGAP44Q17R89 818 aa19.34■□□□□ 0.69
COL1A1-206ENST00000485870 GAB4Q2WGN9 574 aa19.34■□□□□ 0.69
COL1A1-206ENST00000485870 PKN3Q6P5Z2 889 aa19.34■□□□□ 0.69
COL1A1-206ENST00000485870 KLHDC10Q6PID8 442 aa19.34■□□□□ 0.69
COL1A1-206ENST00000485870 MAMSTRQ6ZN01 415 aa19.34■□□□□ 0.69
COL1A1-206ENST00000485870 RBM43Q6ZSC3 357 aaKnown RBP19.34■□□□□ 0.69
COL1A1-206ENST00000485870 SIX6OS1Q8N1H7 587 aa19.34■□□□□ 0.69
COL1A1-206ENST00000485870 TUBGCP2Q9BSJ2 902 aa19.34■□□□□ 0.69
COL1A1-206ENST00000485870 LSM7Q9UK45 103 aaKnown RBP19.34■□□□□ 0.69
COL1A1-206ENST00000485870 PTPRZ1P23471 2315 aaPredicted RBP19.33■□□□□ 0.69
COL1A1-206ENST00000485870 PRR23AA6NEV1 266 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 KCNJ18B7U540 433 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 PIK3R2O00459 728 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 PES1O00541 588 aaKnown RBP19.33■□□□□ 0.68
COL1A1-206ENST00000485870 MBD3O95983 291 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 LCP1P13796 627 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 PON1P27169 355 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 EFEMP1Q12805 493 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 KCNJ12Q14500 433 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 CT47A1Q5JQC4 288 aaPredicted RBP19.33■□□□□ 0.68
COL1A1-206ENST00000485870 LY6G5CQ5SRR4 150 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 PM20D1Q6GTS8 502 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 RSRC2Q7L4I2 434 aaKnown RBP19.33■□□□□ 0.68
COL1A1-206ENST00000485870 ENOSF1Q7L5Y1 443 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 BHLHA9Q7RTU4 235 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 KCTD13Q8WZ19 329 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 OTUB2Q96DC9 234 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 CDK5RAP1Q96SZ6 601 aaKnown RBP19.33■□□□□ 0.68
COL1A1-206ENST00000485870 NDST4Q9H3R1 872 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 ZSCAN32Q9NX65 697 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 APEX2Q9UBZ4 518 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 CNTN6Q9UQ52 1028 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 NFE2L3Q9Y4A8 694 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 FAM186AA6NE01 2351 aa19.33■□□□□ 0.68
COL1A1-206ENST00000485870 GREM1O60565 184 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 HMBSP08397 361 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 TDGF1P13385 188 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 USP8P40818 1118 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 SLC6A11P48066 632 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 VWA3BQ502W6 1294 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 MIIPQ5JXC2 388 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 PMF1Q6P1K2 205 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 SASS6Q6UVJ0 657 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 HTR3DQ70Z44 454 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 C12orf40Q86WS4 652 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 ZNF276Q8N554 614 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 SLC35F5Q8WV83 523 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 ATRIPQ8WXE1 791 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 EZH1Q92800 747 aaPredicted RBP19.32■□□□□ 0.68
COL1A1-206ENST00000485870 FAM81BQ96LP2 452 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 PCDHGA2Q9Y5H1 932 aa19.32■□□□□ 0.68
COL1A1-206ENST00000485870 THAP12O43422 761 aa19.31■□□□□ 0.68
COL1A1-206ENST00000485870 LETM1O95202 739 aaPredicted RBP19.31■□□□□ 0.68
COL1A1-206ENST00000485870 GAD2Q05329 585 aa19.31■□□□□ 0.68
COL1A1-206ENST00000485870 FBXO43Q4G163 708 aa19.31■□□□□ 0.68
COL1A1-206ENST00000485870 CCDC183Q5T5S1 534 aa19.31■□□□□ 0.68
COL1A1-206ENST00000485870 BTBD8Q5XKL5 378 aa19.31■□□□□ 0.68
COL1A1-206ENST00000485870 TMEM25Q86YD3 366 aa19.31■□□□□ 0.68
COL1A1-206ENST00000485870 ENOX1Q8TC92 643 aaKnown RBP19.31■□□□□ 0.68
COL1A1-206ENST00000485870 NELL1Q92832 810 aa19.31■□□□□ 0.68
COL1A1-206ENST00000485870 SIX2Q9NPC8 291 aa19.31■□□□□ 0.68
COL1A1-206ENST00000485870 ACP6Q9NPH0 428 aa19.31■□□□□ 0.68
COL1A1-206ENST00000485870 SPHK2Q9NRA0 654 aa19.31■□□□□ 0.68
COL1A1-206ENST00000485870 AJAP1Q9UKB5 411 aaPredicted RBP19.31■□□□□ 0.68
COL1A1-206ENST00000485870 YJEFN3A6XGL0 299 aa19.3■□□□□ 0.68
COL1A1-206ENST00000485870 BECN2A8MW95 431 aa19.3■□□□□ 0.68
COL1A1-206ENST00000485870 E7ENQ6 273 aa19.3■□□□□ 0.68
COL1A1-206ENST00000485870 K7ESF4 209 aa19.3■□□□□ 0.68
COL1A1-206ENST00000485870 GABBR2O75899 941 aa19.3■□□□□ 0.68
COL1A1-206ENST00000485870 STC2O76061 302 aa19.3■□□□□ 0.68
COL1A1-206ENST00000485870 GNA15P30679 374 aa19.3■□□□□ 0.68
COL1A1-206ENST00000485870 HOXC13P31276 330 aa19.3■□□□□ 0.68
COL1A1-206ENST00000485870 NRLP54845 237 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms