RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 BRCA2P51587 3418 aa27.37■■□□□ 1.97
SHOX2-204ENST00000483851 FGFR3P22607 806 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 SLC11A1P49279 550 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 KRT17Q04695 432 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 BYSLQ13895 437 aaKnown RBP27.36■■□□□ 1.97
SHOX2-204ENST00000483851 VARS2Q5ST30 1063 aaKnown RBP27.36■■□□□ 1.97
SHOX2-204ENST00000483851 BEND5Q7L4P6 421 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 PIK3R5Q8WYR1 880 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 LRRC45Q96CN5 670 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 TMEM209Q96SK2 561 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 USP3Q9Y6I4 520 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 TBKBP1A7MCY6 615 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 CST8O60676 142 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 HSPA9P38646 679 aaKnown RBP27.36■■□□□ 1.97
SHOX2-204ENST00000483851 LMAN1P49257 510 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 DPYSL3Q14195 570 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 DCAF6Q58WW2 860 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 CCDC89Q8N998 374 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 ZNF670Q9BS34 389 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 SNRNP25Q9BV90 132 aaKnown RBP27.36■■□□□ 1.97
SHOX2-204ENST00000483851 CALN1Q9BXU9 219 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 MAK16Q9BXY0 300 aaKnown RBP27.36■■□□□ 1.97
SHOX2-204ENST00000483851 MARCH5Q9NX47 278 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 WHRNQ9P202 907 aa27.36■■□□□ 1.97
SHOX2-204ENST00000483851 ERICH4A6NGS2 130 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 APOC4-APOC2K7ER74 178 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 OPA1O60313 960 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 APOC2P02655 101 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 ITGAVP06756 1048 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 GALTP07902 379 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 SULT1E1P49888 294 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 GATMP50440 423 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 AIF1P55008 147 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 KRT81Q14533 505 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 DPYSL2Q16555 572 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 ZNF280DQ6N043 979 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 VSTM1Q6UX27 236 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 SLC35B2Q8TB61 432 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 CCDC114Q96M63 670 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 ZIM3Q96PE6 472 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 SLC9A7Q96T83 725 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 PRDM16Q9HAZ2 1276 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 ZDHHC18Q9NUE0 388 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 NEU2Q9Y3R4 380 aa27.35■■□□□ 1.97
SHOX2-204ENST00000483851 ABHD14A-ACY1A0A1B0GW23 586 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 GOLGA8KD6RF30 607 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 CD48P09326 243 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 VCPP55072 806 aaKnown RBP27.34■■□□□ 1.97
SHOX2-204ENST00000483851 SMARCB1Q12824 385 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 RAB6CQ53S08 254 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 FAM171A1Q5VUB5 890 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 GPRIN1Q7Z2K8 1008 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 PGAP3Q96FM1 320 aaPredicted RBP27.34■■□□□ 1.97
SHOX2-204ENST00000483851 TRIM31Q9BZY9 425 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 RAB6CQ9H0N0 254 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 GRHL1Q9NZI5 618 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 SNX24Q9Y343 169 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 LTFP02788 710 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 RDXP35241 583 aaKnown RBP27.34■■□□□ 1.97
SHOX2-204ENST00000483851 RPL21P46778 160 aaKnown RBP27.34■■□□□ 1.97
SHOX2-204ENST00000483851 OASLQ15646 514 aaKnown RBP27.34■■□□□ 1.97
SHOX2-204ENST00000483851 FUT10Q6P4F1 479 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 ZNF365Q70YC5 407 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 RFX6Q8HWS3 928 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 FAF2Q96CS3 445 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 PAWRQ96IZ0 340 aaKnown RBP27.34■■□□□ 1.97
SHOX2-204ENST00000483851 RNF157Q96PX1 679 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 FMO2Q99518 471 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 PCDH18Q9HCL0 1135 aa27.34■■□□□ 1.97
SHOX2-204ENST00000483851 COL4A4P53420 1690 aaPredicted RBP27.34■■□□□ 1.97
SHOX2-204ENST00000483851 VWA8A3KMH1 1905 aa27.33■■□□□ 1.97
SHOX2-204ENST00000483851 YJEFN3A6XGL0 299 aa27.33■■□□□ 1.97
SHOX2-204ENST00000483851 E7ENQ6 273 aa27.33■■□□□ 1.97
SHOX2-204ENST00000483851 CAPN9O14815 690 aa27.33■■□□□ 1.97
SHOX2-204ENST00000483851 EFCAB14O75071 495 aa27.33■■□□□ 1.97
SHOX2-204ENST00000483851 TFE3P19532 575 aaPredicted RBP27.33■■□□□ 1.97
SHOX2-204ENST00000483851 ITIH2P19823 946 aa27.33■■□□□ 1.97
SHOX2-204ENST00000483851 BBOF1Q8ND07 529 aa27.33■■□□□ 1.97
SHOX2-204ENST00000483851 NDRG1Q92597 394 aaKnown RBP27.33■■□□□ 1.97
SHOX2-204ENST00000483851 RCOR3Q9P2K3 495 aaPredicted RBP27.33■■□□□ 1.97
SHOX2-204ENST00000483851 DNPEPQ9ULA0 475 aa27.33■■□□□ 1.97
SHOX2-204ENST00000483851 H7C4K7 107 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 DGKIO75912 1065 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 USP17L7P0C7H9 530 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 MAGEA11P43364 429 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 CAV1Q03135 178 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 CALCOCO2Q13137 446 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 CTXN3Q4LDR2 81 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 SLC39A12Q504Y0 691 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 SPDYCQ5MJ68 293 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 NECAB2Q7Z6G3 386 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 RHOBTB2Q9BYZ6 727 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 GPR62Q9BZJ7 368 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 NEUROG2Q9H2A3 272 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 TMEM51Q9NW97 253 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 MTRF1LQ9UGC7 380 aaKnown RBP27.32■■□□□ 1.96
SHOX2-204ENST00000483851 ZNF148Q9UQR1 794 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 CEP350Q5VT06 3117 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 LTBP2Q14767 1821 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 F9P00740 461 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms