RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 RGL4Q8IZJ4 473 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 PDILTQ8N807 584 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 PNPLA1Q8N8W4 532 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 PDZD8Q8NEN9 1154 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 IPO4Q8TEX9 1081 aaKnown RBP7.83□□□□□ -1.16
CSDE1-206ENST00000483030 OVCA2Q8WZ82 227 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 ZNF419Q96HQ0 510 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-206ENST00000483030 HSPA12BQ96MM6 686 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 MED10Q9BTT4 135 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 NACA2Q9H009 215 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 SLC6A17Q9H1V8 727 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 DNAJC17Q9NVM6 304 aaKnown RBP7.83□□□□□ -1.16
CSDE1-206ENST00000483030 DNAAF2Q9NVR5 837 aaKnown RBP7.83□□□□□ -1.16
CSDE1-206ENST00000483030 GMIPQ9P107 970 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 STARD13Q9Y3M8 1113 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 PCDHB9Q9Y5E1 797 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 RAD54BQ9Y620 910 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 ASCC3Q8N3C0 2202 aaKnown RBP7.83□□□□□ -1.16
CSDE1-206ENST00000483030 AKAP13Q12802 2813 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 THADAQ6YHU6 1953 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 FASNP49327 2511 aaKnown RBP7.82□□□□□ -1.16
CSDE1-206ENST00000483030 PRRT4C9JH25 899 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 CLIC2O15247 247 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 TGFB1I1O43294 461 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 PHACTR2O75167 634 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 NDUFS2O75306 463 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 TBX18O95935 607 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 ZDHHC11BP0C7U3 371 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 PGFP49763 221 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 CYP2J2P51589 502 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 SLC5A3P53794 718 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 CYP24A1Q07973 514 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 SLC14A1Q13336 389 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 CAMK2BQ13554 666 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 PSMD6Q15008 389 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 SYCP2LQ5T4T6 812 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 SNX30Q5VWJ9 437 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 GRAMD4Q6IC98 578 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 TPGS1Q6ZTW0 290 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 PAQR9Q6ZVX9 377 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 SCFD1Q8WVM8 642 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 ADAMTS14Q8WXS8 1223 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 ZNF516Q92618 1163 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 MRGPRX1Q96LB2 322 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 XPO6Q96QU8 1125 aaKnown RBP7.82□□□□□ -1.16
CSDE1-206ENST00000483030 CGRRF1Q99675 332 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 XYLT2Q9H1B5 865 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 FAM124BQ9H5Z6 455 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-206ENST00000483030 CD248Q9HCU0 757 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 CD93Q9NPY3 652 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 CACNA2D2Q9NY47 1150 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 IL37Q9NZH6 218 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 GPSM3Q9Y4H4 160 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 ASPMQ8IZT6 3477 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 ZNF638Q14966 1978 aaKnown RBP7.82□□□□□ -1.16
CSDE1-206ENST00000483030 DENND4CQ5VZ89 1909 aa7.82□□□□□ -1.16
CSDE1-206ENST00000483030 ATP8B3O60423 1300 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 PCNX2A6NKB5 2137 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 WASH3PC4AMC7 463 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 NEDD8-MDP1E9PL57 170 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 CACNG3O60359 315 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 TLR5O60602 858 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 GJB3O75712 270 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 AP1G2O75843 785 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 FTH1P19P0C7X4 201 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 TYRP14679 529 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 GNSP15586 552 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 ATICP31939 592 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 CASP4P49662 377 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 PSEN1P49768 467 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 TUBP50607 506 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 SOWAHCQ53LP3 525 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-206ENST00000483030 WDR45BQ5MNZ6 344 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 KIAA1324Q6UXG2 1013 aaKnown RBP7.81□□□□□ -1.16
CSDE1-206ENST00000483030 CCNI2Q6ZMN8 369 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-206ENST00000483030 TOGARAM2Q6ZUX3 1019 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 HTR3DQ70Z44 454 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 EPM2AIP1Q7L775 607 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-206ENST00000483030 ACOT1Q86TX2 421 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 SLCO6A1Q86UG4 719 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 FAM35AQ86V20 835 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 NELFCDQ8IXH7 590 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 FUKQ8N0W3 1084 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 XXYLT1Q8NBI6 393 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 ZNF507Q8TCN5 953 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 BHMTQ93088 406 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 SYAP1Q96A49 352 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-206ENST00000483030 ELMO3Q96BJ8 720 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 SMARCD1Q96GM5 515 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 TNIP3Q96KP6 325 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 GABRG3Q99928 467 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 DUSP9Q99956 384 aaKnown RBP7.81□□□□□ -1.16
CSDE1-206ENST00000483030 BBS2Q9BXC9 721 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 KLF16Q9BXK1 252 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-206ENST00000483030 TRIM9Q9C026 710 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 GZF1Q9H116 711 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-206ENST00000483030 SMYD3Q9H7B4 428 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 DMAP1Q9NPF5 467 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-206ENST00000483030 AGPAT3Q9NRZ7 376 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 COMMD8Q9NX08 183 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms