RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.53□□□□□ -0.24
COL21A1-209ENST00000482933 FAM49BQ9NUQ9 324 aa13.53□□□□□ -0.24
COL21A1-209ENST00000482933 CHMP5Q9NZZ3 219 aa13.53□□□□□ -0.24
COL21A1-209ENST00000482933 CFAP97Q9P2B7 532 aa13.53□□□□□ -0.24
COL21A1-209ENST00000482933 HMGXB4Q9UGU5 601 aa13.53□□□□□ -0.24
COL21A1-209ENST00000482933 SH3BP1Q9Y3L3 701 aa13.53□□□□□ -0.24
COL21A1-209ENST00000482933 MYH10P35580 1976 aa13.53□□□□□ -0.24
COL21A1-209ENST00000482933 COCHO43405 550 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 CILPO75339 1184 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 BEST1O76090 585 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 RETP07949 1114 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 SDHBP21912 280 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 ADORA2BP29275 332 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 PRCPP42785 496 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 MXI1P50539 228 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 FKBP3Q00688 224 aaKnown RBP13.52□□□□□ -0.25
COL21A1-209ENST00000482933 DHCR24Q15392 516 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 LPAL2Q16609 132 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 PKN3Q6P5Z2 889 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 CEP68Q76N32 757 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 FBXL13Q8NEE6 735 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 ENGASEQ8NFI3 743 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 RPLP0P6Q8NHW5 317 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 SMARCE1Q969G3 411 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 OTUB2Q96DC9 234 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 TWNKQ96RR1 684 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 NACA2Q9H009 215 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 FAM124BQ9H5Z6 455 aaPredicted RBP13.52□□□□□ -0.25
COL21A1-209ENST00000482933 PNPLA8Q9NP80 782 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 TLR8Q9NR97 1041 aaKnown RBP13.52□□□□□ -0.25
COL21A1-209ENST00000482933 GMIPQ9P107 970 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 USP18Q9UMW8 372 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 OTOGLQ3ZCN5 2332 aa13.52□□□□□ -0.25
COL21A1-209ENST00000482933 EP300Q09472 2414 aaPredicted RBP13.51□□□□□ -0.25
COL21A1-209ENST00000482933 E2F8A0AVK6 867 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 PRR5-ARHGAP8B1AHC4 643 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 SLC16A3O15427 465 aaKnown RBP13.51□□□□□ -0.25
COL21A1-209ENST00000482933 LRP3O75074 770 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 ADH1CP00326 375 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 CD58P19256 250 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 EIF2DP41214 584 aaKnown RBP13.51□□□□□ -0.25
COL21A1-209ENST00000482933 ARHGAP8P85298 464 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 LMNB2Q03252 620 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 STIM1Q13586 685 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 PUM1Q14671 1186 aaKnown RBP eCLIP13.51□□□□□ -0.25
COL21A1-209ENST00000482933 NAIF1Q69YI7 327 aaPredicted RBP13.51□□□□□ -0.25
COL21A1-209ENST00000482933 CLEC20AQ6ZU45 233 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 SYT13Q7L8C5 426 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.51□□□□□ -0.25
COL21A1-209ENST00000482933 SNIP1Q8TAD8 396 aaKnown RBP13.51□□□□□ -0.25
COL21A1-209ENST00000482933 SPATA20Q8TB22 786 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 RMDN1Q96DB5 314 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 DUSP9Q99956 384 aaKnown RBP13.51□□□□□ -0.25
COL21A1-209ENST00000482933 RAB20Q9NX57 234 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 PCDHA5Q9Y5H7 936 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 GVINP1Q7Z2Y8 2422 aa13.51□□□□□ -0.25
COL21A1-209ENST00000482933 ATG2BQ96BY7 2078 aa13.5□□□□□ -0.25
COL21A1-209ENST00000482933 ST8SIA5O15466 376 aa13.5□□□□□ -0.25
COL21A1-209ENST00000482933 TLR5O60602 858 aa13.5□□□□□ -0.25
COL21A1-209ENST00000482933 CYP17A1P05093 508 aa13.5□□□□□ -0.25
COL21A1-209ENST00000482933 OPRD1P41143 372 aa13.5□□□□□ -0.25
COL21A1-209ENST00000482933 PPP1R2P41236 205 aa13.5□□□□□ -0.25
COL21A1-209ENST00000482933 SMCPP49901 116 aaPredicted RBP13.5□□□□□ -0.25
COL21A1-209ENST00000482933 LRRC63Q05C16 580 aa13.5□□□□□ -0.25
COL21A1-209ENST00000482933 TCERG1LQ5VWI1 586 aa13.5□□□□□ -0.25
COL21A1-209ENST00000482933 ELOA2Q8IYF1 753 aaPredicted RBP13.5□□□□□ -0.25
COL21A1-209ENST00000482933 WHAMMQ8TF30 809 aa13.5□□□□□ -0.25
COL21A1-209ENST00000482933 GAB3Q8WWW8 586 aa13.5□□□□□ -0.25
COL21A1-209ENST00000482933 EEF2KMTQ96G04 330 aa13.5□□□□□ -0.25
COL21A1-209ENST00000482933 CCSER2Q9H7U1 834 aa13.5□□□□□ -0.25
COL21A1-209ENST00000482933 SCML2Q9UQR0 700 aa13.5□□□□□ -0.25
COL21A1-209ENST00000482933 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.49□□□□□ -0.25
COL21A1-209ENST00000482933 RPP40O75818 363 aaKnown RBP13.49□□□□□ -0.25
COL21A1-209ENST00000482933 CCDC192P0DO97 292 aa13.49□□□□□ -0.25
COL21A1-209ENST00000482933 ACO1P21399 889 aaKnown RBP13.49□□□□□ -0.25
COL21A1-209ENST00000482933 GAD2Q05329 585 aa13.49□□□□□ -0.25
COL21A1-209ENST00000482933 GOLGA8FQ08AF8 430 aa13.49□□□□□ -0.25
COL21A1-209ENST00000482933 GOLGA8DPQ0D2H9 430 aa13.49□□□□□ -0.25
COL21A1-209ENST00000482933 SPEM2Q0P670 501 aa13.49□□□□□ -0.25
COL21A1-209ENST00000482933 SRSF5Q13243 272 aaKnown RBP13.49□□□□□ -0.25
COL21A1-209ENST00000482933 DMC1Q14565 340 aa13.49□□□□□ -0.25
COL21A1-209ENST00000482933 PREPLQ4J6C6 727 aaPredicted RBP13.49□□□□□ -0.25
COL21A1-209ENST00000482933 ZNF394Q53GI3 561 aa13.49□□□□□ -0.25
COL21A1-209ENST00000482933 DCAF17Q5H9S7 520 aaPredicted RBP13.49□□□□□ -0.25
COL21A1-209ENST00000482933 ANKRD40Q6AI12 368 aa13.49□□□□□ -0.25
COL21A1-209ENST00000482933 RHBDF2Q6PJF5 856 aa13.49□□□□□ -0.25
COL21A1-209ENST00000482933 CACNA2D4Q7Z3S7 1137 aa13.49□□□□□ -0.25
COL21A1-209ENST00000482933 ZC3H3Q8IXZ2 948 aaKnown RBP13.49□□□□□ -0.25
COL21A1-209ENST00000482933 EZH1Q92800 747 aaPredicted RBP13.49□□□□□ -0.25
COL21A1-209ENST00000482933 SEMA4DQ92854 862 aa13.49□□□□□ -0.25
COL21A1-209ENST00000482933 PNKPQ96T60 521 aa13.49□□□□□ -0.25
COL21A1-209ENST00000482933 DUSP16Q9BY84 665 aa13.49□□□□□ -0.25
COL21A1-209ENST00000482933 DLL3Q9NYJ7 618 aa13.49□□□□□ -0.25
COL21A1-209ENST00000482933 HHLA1C9JL84 531 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 PSMA7O14818 248 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 AXIN1O15169 862 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 FOXD2O60548 495 aaPredicted RBP13.48□□□□□ -0.25
COL21A1-209ENST00000482933 APBB3O95704 486 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 APODP05090 189 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 ADH5P11766 374 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms