RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 HEBP1Q9NRV9 189 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 YJEFN3A6XGL0 299 aa21.93■■□□□ 1.1
SEC13-217ENST00000482647 E7ENQ6 273 aa21.93■■□□□ 1.1
SEC13-217ENST00000482647 SLC9A3R1O14745 358 aaPredicted RBP21.93■■□□□ 1.1
SEC13-217ENST00000482647 SART1O43290 800 aaKnown RBP21.93■■□□□ 1.1
SEC13-217ENST00000482647 PDGFBP01127 241 aaPredicted RBP21.93■■□□□ 1.1
SEC13-217ENST00000482647 IFNAR2P48551 515 aa21.93■■□□□ 1.1
SEC13-217ENST00000482647 KPNA1P52294 538 aaPredicted RBP21.93■■□□□ 1.1
SEC13-217ENST00000482647 SNX16P57768 344 aa21.93■■□□□ 1.1
SEC13-217ENST00000482647 PDCLQ13371 301 aa21.93■■□□□ 1.1
SEC13-217ENST00000482647 ZNF638Q14966 1978 aaKnown RBP21.93■■□□□ 1.1
SEC13-217ENST00000482647 ITPRIPL2Q3MIP1 535 aa21.93■■□□□ 1.1
SEC13-217ENST00000482647 BHLHA9Q7RTU4 235 aa21.93■■□□□ 1.1
SEC13-217ENST00000482647 NOP9Q86U38 636 aaKnown RBP21.93■■□□□ 1.1
SEC13-217ENST00000482647 ZNF677Q86XU0 584 aa21.93■■□□□ 1.1
SEC13-217ENST00000482647 SUGP1Q8IWZ8 645 aaKnown RBP21.93■■□□□ 1.1
SEC13-217ENST00000482647 FLCNQ8NFG4 579 aa21.93■■□□□ 1.1
SEC13-217ENST00000482647 ZFRQ96KR1 1074 aaKnown RBP21.93■■□□□ 1.1
SEC13-217ENST00000482647 ABCC13Q9NSE7 274 aa21.93■■□□□ 1.1
SEC13-217ENST00000482647 GTSE1Q9NYZ3 720 aa21.93■■□□□ 1.1
SEC13-217ENST00000482647 CYTH4Q9UIA0 394 aa21.93■■□□□ 1.1
SEC13-217ENST00000482647 NUDT5Q9UKK9 219 aa21.93■■□□□ 1.1
SEC13-217ENST00000482647 NUP210Q8TEM1 1887 aaPredicted RBP21.92■■□□□ 1.1
SEC13-217ENST00000482647 PATJQ8NI35 1801 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 E2F8A0AVK6 867 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 MAN2B1O00754 1011 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 TNK2Q07912 1038 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 RUNX3Q13761 415 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 TAF3Q5VWG9 929 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 TRIM68Q6AZZ1 485 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 ZNF852Q6ZMS4 543 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 TPRG1Q6ZUI0 275 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 TMEM35BQ8NCS4 154 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 EPS8L1Q8TE68 723 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 RNF139Q8WU17 664 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 DDX1Q92499 740 aaKnown RBP21.92■■□□□ 1.1
SEC13-217ENST00000482647 ATP2A3Q93084 1043 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 PPP1R13BQ96KQ4 1090 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 KLF16Q9BXK1 252 aaPredicted RBP21.92■■□□□ 1.1
SEC13-217ENST00000482647 EBF3Q9H4W6 596 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 C8orf33Q9H7E9 229 aaPredicted RBP21.92■■□□□ 1.1
SEC13-217ENST00000482647 TBC1D17Q9HA65 648 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 OLA1Q9NTK5 396 aaKnown RBP21.92■■□□□ 1.1
SEC13-217ENST00000482647 SH3BP1Q9Y3L3 701 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 WNT6Q9Y6F9 365 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 PIAS3Q9Y6X2 628 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 DENND4CQ5VZ89 1909 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 OBSL1O75147 1896 aa21.92■■□□□ 1.1
SEC13-217ENST00000482647 E5RJQ4 531 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 TPM3P06753 285 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 CCDC172P0C7W6 258 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 CLCN5P51795 746 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 EFEMP1Q12805 493 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 C1orf228Q6PIY5 440 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 MIB1Q86YT6 1006 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 FMNL3Q8IVF7 1028 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 RNF214Q8ND24 703 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 C1orf131Q8NDD1 294 aaKnown RBP21.91■■□□□ 1.1
SEC13-217ENST00000482647 MSANTD3Q96H12 275 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 SYNCQ9H7C4 482 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 MARCH2Q9P0N8 246 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 TBC1D14Q9P2M4 693 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 STRIP2Q9ULQ0 834 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 MYO6Q9UM54 1294 aa21.91■■□□□ 1.1
SEC13-217ENST00000482647 ANAPC1Q9H1A4 1944 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 KANSL1LA0AUZ9 987 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 MDM4O15151 490 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 LSM8O95777 96 aaKnown RBP21.9■■□□□ 1.1
SEC13-217ENST00000482647 COG7P83436 770 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 AMPD2Q01433 879 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 CDR2Q01850 454 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 EML3Q32P44 896 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 ASTLQ6HA08 431 aaPredicted RBP21.9■■□□□ 1.1
SEC13-217ENST00000482647 CPA6Q8N4T0 437 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 TTC8Q8TAM2 541 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 CLEC4CQ8WTT0 213 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 EDEM1Q92611 657 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 NELL2Q99435 816 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 DDX23Q9BUQ8 820 aaKnown RBP21.9■■□□□ 1.1
SEC13-217ENST00000482647 TRIM62Q9BVG3 475 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 NUP58Q9BVL2 599 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 LINC00597Q9H2U6 94 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 HPS4Q9NQG7 708 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 IFNKQ9P0W0 207 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 RASAL2Q9UJF2 1139 aa21.9■■□□□ 1.1
SEC13-217ENST00000482647 NOCTQ9UK39 431 aaKnown RBP21.9■■□□□ 1.1
SEC13-217ENST00000482647 LSM7Q9UK45 103 aaKnown RBP21.9■■□□□ 1.1
SEC13-217ENST00000482647 MRPS17Q9Y2R5 130 aaKnown RBP21.9■■□□□ 1.1
SEC13-217ENST00000482647 PAPSS1O43252 624 aaPredicted RBP21.89■■□□□ 1.09
SEC13-217ENST00000482647 LTFP02788 710 aa21.89■■□□□ 1.09
SEC13-217ENST00000482647 MMEP08473 750 aa21.89■■□□□ 1.09
SEC13-217ENST00000482647 IRF1P10914 325 aa21.89■■□□□ 1.09
SEC13-217ENST00000482647 ARSAP15289 507 aa21.89■■□□□ 1.09
SEC13-217ENST00000482647 CDH5P33151 784 aaPredicted RBP21.89■■□□□ 1.09
SEC13-217ENST00000482647 ARID5AQ03989 594 aa21.89■■□□□ 1.09
SEC13-217ENST00000482647 NR1H3Q13133 447 aa21.89■■□□□ 1.09
SEC13-217ENST00000482647 RALGPS2Q86X27 583 aaPredicted RBP21.89■■□□□ 1.09
SEC13-217ENST00000482647 IPO4Q8TEX9 1081 aaKnown RBP21.89■■□□□ 1.09
SEC13-217ENST00000482647 CPXM1Q96SM3 734 aa21.89■■□□□ 1.09
SEC13-217ENST00000482647 EDEM3Q9BZQ6 932 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms