RNA–Protein interactions for RNA: ENST00000481478.1

CACNA1D-206, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 1 (best)

Gene CACNA1D, Length 5,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-206ENST00000481478 ZNF10P21506 573 aaPredicted RBP13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 LHX1P48742 406 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 CDC42EP5Q6NZY7 148 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 LRRC40Q9H9A6 602 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 PCDHB12Q9Y5F1 795 aa13.38□□□□□ -0.27
CACNA1D-206ENST00000481478 ZMYM2Q9UBW7 1377 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 MYMKA6NI61 221 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 PDZK1P1A8MUH7 402 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 AP1G2O75843 785 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 ACADSP16219 412 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 NFE2Q16621 373 aaPredicted RBP13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 STYK1Q6J9G0 422 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 CCDC81Q6ZN84 652 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 CLYBLQ8N0X4 340 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 ZNF473Q8WTR7 871 aaKnown RBP13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 ERP27Q96DN0 273 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 IRX2Q9BZI1 471 aaPredicted RBP13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 TBC1D13Q9NVG8 400 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 MARCOQ9UEW3 520 aaPredicted RBP13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 CENPXA8MT69 81 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 M0QYT0 321 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 NKRFO15226 690 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 TRIM13O60858 407 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 ZC3H11AO75152 810 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 CKMP06732 381 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 RHOCP08134 193 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 AVPR1AP37288 418 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 PEX5P50542 639 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 MRPS35P82673 323 aaKnown RBP13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 NFIAQ12857 509 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 PRKAA1Q13131 559 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 DSG4Q86SJ6 1040 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 SLC22A9Q8IVM8 553 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 C9orf72Q96LT7 481 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 RAD21L1Q9H4I0 556 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 IARS2Q9NSE4 1012 aaKnown RBP13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 KANSL3Q9P2N6 904 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 STARD13Q9Y3M8 1113 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 TMEM114B3SHH9 223 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 PABPC1P11940 636 aaKnown RBP13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 RHOAP61586 193 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 OTOAQ7RTW8 1153 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 REXO1L1PQ8IX06 675 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 SYTL1Q8IYJ3 562 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 GALNT4Q8N4A0 578 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 STARD8Q92502 1023 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 C1QTNF7Q9BXJ2 289 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 L2HGDHQ9H9P8 463 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 PDP2Q9P2J9 529 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 NCAM2O15394 837 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 SUPT7LO94864 414 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 TNNI3P19429 210 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 THPOP40225 353 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 RAD23AP54725 363 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 DDX39BQ13838 428 aaKnown RBP13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 POMGNT2Q8NAT1 580 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 GGA3Q9NZ52 723 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 IL1RAPL1Q9NZN1 696 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 GTF3C4Q9UKN8 822 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 PADI4Q9UM07 663 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 RGPD8O14715 1765 aaPredicted RBP13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 CAMTA1Q9Y6Y1 1673 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 NALCNQ8IZF0 1738 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 TRIM24O15164 1050 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 UQCRBP14927 111 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 PSMC3P17980 439 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 CYP2A7P20853 494 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 RFX3P48380 749 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 BTKQ06187 659 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 ANGEL2Q5VTE6 544 aaKnown RBP13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 CCDC103Q8IW40 242 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 MCOLN3Q8TDD5 553 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 SLITRK2Q9H156 845 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 TRIT1Q9H3H1 467 aaKnown RBP13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 JMJD4Q9H9V9 463 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 GALNT8Q9NY28 637 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 VTI1BQ9UEU0 232 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 POLG2Q9UHN1 485 aa13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 PNMA8BQ9ULN7 279 aaPredicted RBP13.37□□□□□ -0.27
CACNA1D-206ENST00000481478 SMIM22K7EJ46 135 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 COMTP21964 271 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 RAB27AP51159 221 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 AGBL3Q8NEM8 1001 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 TRIM51Q9BSJ1 452 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 HPS4Q9NQG7 708 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 AVENQ9NQS1 362 aaPredicted RBP13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 RRN3Q9NYV6 651 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 SF3B1O75533 1304 aaKnown RBP eCLIP13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 MRC1P22897 1456 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 SDR42E2A6NKP2 422 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 PMPCBO75439 489 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 KRT6AP02538 564 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 KRT6BP04259 564 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 RPA1P27694 616 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 SERPINB3P29508 390 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 KRT6CP48668 564 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 ITGA8P53708 1063 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 BCAT1P54687 386 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 PPIL2Q13356 520 aa13.36□□□□□ -0.27
CACNA1D-206ENST00000481478 TRPM8Q7Z2W7 1104 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms