RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 RSPRY1Q96DX4 576 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 RMDN3Q96TC7 470 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 PRPF18Q99633 342 aaKnown RBP4.46□□□□□ -1.7
CBX3-207ENST00000481300 HELLSQ9NRZ9 838 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 PTGFRNQ9P2B2 879 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 VPS51Q9UID3 782 aa4.46□□□□□ -1.7
CBX3-207ENST00000481300 CECR2Q9BXF3 1484 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 AQP12BA6NM10 295 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 AGPSO00116 658 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 QSOX1O00391 747 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 NPC1O15118 1278 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 EBLN1P0CF75 366 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 ARP10275 920 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 PDIA3P30101 505 aaKnown RBP4.45□□□□□ -1.7
CBX3-207ENST00000481300 ALDH18A1P54886 795 aaKnown RBP4.45□□□□□ -1.7
CBX3-207ENST00000481300 HNRNPA0Q13151 305 aaKnown RBP4.45□□□□□ -1.7
CBX3-207ENST00000481300 ATP1A4Q13733 1029 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 DHX8Q14562 1220 aaKnown RBP4.45□□□□□ -1.7
CBX3-207ENST00000481300 CLCA4Q14CN2 919 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 ST3GAL2Q16842 350 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 ERCC6LQ2NKX8 1250 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 STRIP1Q5VSL9 837 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 PARS2Q7L3T8 475 aaKnown RBP4.45□□□□□ -1.7
CBX3-207ENST00000481300 WDR53Q7Z5U6 358 aaPredicted RBP4.45□□□□□ -1.7
CBX3-207ENST00000481300 SIRT6Q8N6T7 355 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 ANKRD42Q8N9B4 389 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 NGDNQ8NEJ9 315 aaKnown RBP4.45□□□□□ -1.7
CBX3-207ENST00000481300 RP9Q8TA86 221 aaKnown RBP4.45□□□□□ -1.7
CBX3-207ENST00000481300 FAM71BQ8TC56 605 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 VPS50Q96JG6 964 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 HERPUD2Q9BSE4 406 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 PAGR1Q9BTK6 254 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 R3HDMLQ9H3Y0 253 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 TMEM8AQ9HCN3 771 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 ALG13Q9NP73 1137 aaKnown RBP4.45□□□□□ -1.7
CBX3-207ENST00000481300 TRIM36Q9NQ86 728 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 DACT1Q9NYF0 836 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 IGSF9Q9P2J2 1179 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 RIMKLBQ9ULI2 386 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 SLC27A6Q9Y2P4 619 aa4.45□□□□□ -1.7
CBX3-207ENST00000481300 MORC2Q9Y6X9 1032 aaPredicted RBP4.45□□□□□ -1.7
CBX3-207ENST00000481300 RSF1Q96T23 1441 aaPredicted RBP4.45□□□□□ -1.7
CBX3-207ENST00000481300 LINC00473A8K010 186 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 MASP2O00187 686 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 AP4M1O00189 453 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 SYT5O00445 386 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 ASNA1O43681 348 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 USP1O94782 785 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 TMEM225BP0DP42 221 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 NPPBP16860 134 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 ENGP17813 658 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 GKP32189 559 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 CYP2C18P33260 490 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 HALP42357 657 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 EIF4A1P60842 406 aaKnown RBP4.44□□□□□ -1.7
CBX3-207ENST00000481300 MRPS21P82921 87 aaKnown RBP4.44□□□□□ -1.7
CBX3-207ENST00000481300 PTK2BQ14289 1009 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 P3H1Q32P28 736 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 TBC1D25Q3MII6 688 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 FAM153CQ494X1 144 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 DENND2CQ68D51 928 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 DPY19L3Q6ZPD9 716 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 MYCT1Q8N699 235 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 SPATA5Q8NB90 893 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 STYXQ8WUJ0 223 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 HAPLN3Q96S86 360 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 EPS8L2Q9H6S3 715 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 SERTAD4Q9NUC0 356 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 DTNAQ9Y4J8 743 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 BICRAQ9NZM4 1560 aa4.44□□□□□ -1.7
CBX3-207ENST00000481300 COL15A1P39059 1388 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 LOC102724159A0A0B4J2E5 919 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 OR2W5A6NFC9 320 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 GCOM1H8Y6P7 765 aaPredicted RBP4.43□□□□□ -1.7
CBX3-207ENST00000481300 J3KTA2 159 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 M0R3H8 397 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 ACKR2O00590 384 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 TRIM38O00635 465 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 CES2O00748 559 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 PMPCBO75439 489 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 WDR47O94967 919 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 TNFRSF6BO95407 300 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 ITGA2BP08514 1039 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 NPSP0C0P6 89 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 FAM163BP0C2L3 166 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 CREB1P16220 341 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 CXCR5P32302 372 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 SERPINF1P36955 418 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 PLA2G5P39877 138 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 GRK6P43250 576 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 CCT8P50990 548 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 EEFSECP57772 596 aaKnown RBP4.43□□□□□ -1.7
CBX3-207ENST00000481300 C21orf58P58505 322 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 E2F1Q01094 437 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 GALNT1Q10472 559 aaPredicted RBP4.43□□□□□ -1.7
CBX3-207ENST00000481300 ZNF169Q14929 603 aaPredicted RBP4.43□□□□□ -1.7
CBX3-207ENST00000481300 PWP2Q15269 919 aaKnown RBP4.43□□□□□ -1.7
CBX3-207ENST00000481300 TUBB8Q3ZCM7 444 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 COLEC12Q5KU26 742 aa4.43□□□□□ -1.7
CBX3-207ENST00000481300 ANKRD16Q6P6B7 361 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms