RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 TMEM134Q9H6X4 195 aa12.71□□□□□ -0.37
USP11-208ENST00000480104 SPHK2Q9NRA0 654 aa12.71□□□□□ -0.37
USP11-208ENST00000480104 ARHGAP28Q9P2N2 729 aa12.71□□□□□ -0.37
USP11-208ENST00000480104 HIVEP1P15822 2718 aa12.71□□□□□ -0.38
USP11-208ENST00000480104 AKAP9Q99996 3911 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 ZNF840PA6NDX5 716 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 PIRO00625 290 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 VILLO15195 856 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 CSO75390 466 aaKnown RBP12.7□□□□□ -0.38
USP11-208ENST00000480104 MED24O75448 989 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 TOM1L1O75674 476 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 FSBPO95073 299 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 ACADMP11310 421 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 ACP1P24666 158 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 INHBCP55103 352 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 PEX3P56589 373 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 USP46P62068 366 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 E2F1Q01094 437 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 GRIN1Q05586 938 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 PDIA5Q14554 519 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 ADCK5Q3MIX3 580 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 CDCP2Q5VXM1 449 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 GALNT17Q6IS24 598 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 PIK3AP1Q6ZUJ8 805 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 USP53Q70EK8 1073 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 DDX42Q86XP3 938 aaKnown RBP eCLIP12.7□□□□□ -0.38
USP11-208ENST00000480104 CATSPER3Q86XQ3 398 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 BBS7Q8IWZ6 715 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 OTUB2Q96DC9 234 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 SGF29Q96ES7 293 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 AIFM3Q96NN9 605 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 DEPDC7Q96QD5 511 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 ORAI3Q9BRQ5 295 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 SLC25A18Q9H1K4 315 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 NCOA5Q9HCD5 579 aaKnown RBP12.7□□□□□ -0.38
USP11-208ENST00000480104 WDR70Q9NW82 654 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 KCNJ14Q9UNX9 436 aa12.7□□□□□ -0.38
USP11-208ENST00000480104 A0A1W2PNU3 283 aaPredicted RBP12.69□□□□□ -0.38
USP11-208ENST00000480104 YKT6O15498 198 aa12.69□□□□□ -0.38
USP11-208ENST00000480104 TSPAN3O60637 253 aa12.69□□□□□ -0.38
USP11-208ENST00000480104 OAS1P00973 400 aaKnown RBP12.69□□□□□ -0.38
USP11-208ENST00000480104 MBL2P11226 248 aaPredicted RBP12.69□□□□□ -0.38
USP11-208ENST00000480104 RBMS1P29558 406 aaKnown RBP12.69□□□□□ -0.38
USP11-208ENST00000480104 CALCRLQ16602 461 aa12.69□□□□□ -0.38
USP11-208ENST00000480104 PROX2Q3B8N5 592 aa12.69□□□□□ -0.38
USP11-208ENST00000480104 C3orf38Q5JPI3 329 aa12.69□□□□□ -0.38
USP11-208ENST00000480104 SFMBT2Q5VUG0 894 aa12.69□□□□□ -0.38
USP11-208ENST00000480104 ZNF787Q6DD87 383 aa12.69□□□□□ -0.38
USP11-208ENST00000480104 IGF2-ASQ6U949 168 aa12.69□□□□□ -0.38
USP11-208ENST00000480104 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.69□□□□□ -0.38
USP11-208ENST00000480104 ZNF564Q8TBZ8 553 aaPredicted RBP12.69□□□□□ -0.38
USP11-208ENST00000480104 BRF1Q92994 677 aa12.69□□□□□ -0.38
USP11-208ENST00000480104 SLC6A18Q96N87 628 aa12.69□□□□□ -0.38
USP11-208ENST00000480104 HAPLN2Q9GZV7 340 aa12.69□□□□□ -0.38
USP11-208ENST00000480104 TUFT1Q9NNX1 390 aa12.69□□□□□ -0.38
USP11-208ENST00000480104 SPG11Q96JI7 2443 aa12.69□□□□□ -0.38
USP11-208ENST00000480104 NAV3Q8IVL0 2385 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 NEDD8-MDP1E9PL57 170 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 CACNG3O60359 315 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 SEMA4FO95754 770 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 ABL1P00519 1130 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 ACAT1P24752 427 aaKnown RBP12.68□□□□□ -0.38
USP11-208ENST00000480104 TXKP42681 527 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 COPAP53621 1224 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 ASIC1P78348 528 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 MCL1Q07820 350 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 BNIP3Q12983 259 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 ENOX2Q16206 610 aaKnown RBP12.68□□□□□ -0.38
USP11-208ENST00000480104 EARS2Q5JPH6 523 aaKnown RBP12.68□□□□□ -0.38
USP11-208ENST00000480104 JADE1Q6IE81 842 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 SLC46A1Q96NT5 459 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 PKMYT1Q99640 499 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 LRWD1Q9UFC0 647 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 ATXN7L1Q9ULK2 861 aaPredicted RBP12.68□□□□□ -0.38
USP11-208ENST00000480104 SATB2Q9UPW6 733 aa12.68□□□□□ -0.38
USP11-208ENST00000480104 SCN1AP35498 2009 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 CLDN3O15551 220 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 OPA1O60313 960 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 SYNCRIPO60506 623 aaKnown RBP12.67□□□□□ -0.38
USP11-208ENST00000480104 WNT1P04628 370 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 CPA1P15085 419 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 MATR3P43243 847 aaKnown RBP eCLIP12.67□□□□□ -0.38
USP11-208ENST00000480104 ARRB1P49407 418 aaPredicted RBP12.67□□□□□ -0.38
USP11-208ENST00000480104 TAF6P49848 677 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 BCAT1P54687 386 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 RACK1P63244 317 aaKnown RBP12.67□□□□□ -0.38
USP11-208ENST00000480104 MYL7Q01449 175 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 NCAPHQ15003 741 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 CFAP221Q4G0U5 840 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 INTS6LQ5JSJ4 861 aaKnown RBP12.67□□□□□ -0.38
USP11-208ENST00000480104 KANSL1Q7Z3B3 1105 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 TICAM1Q8IUC6 712 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 TRIM22Q8IYM9 498 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 CCSER1Q9C0I3 900 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 KMT5AQ9NQR1 393 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 GTF3C4Q9UKN8 822 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 PLAAQ9Y263 795 aa12.67□□□□□ -0.38
USP11-208ENST00000480104 PMS2P1A4D2B8 440 aa12.66□□□□□ -0.38
USP11-208ENST00000480104 TYRP14679 529 aa12.66□□□□□ -0.38
USP11-208ENST00000480104 CASRP41180 1078 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms