RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 INO80BQ9C086 356 aaPredicted RBP21.98■■□□□ 1.11
SDF4-206ENST00000478938 HIPK3Q9H422 1215 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 SIRPGQ9P1W8 387 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 SORCS3Q9UPU3 1222 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 MYRFQ9Y2G1 1151 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 SCINQ9Y6U3 715 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 ZNFX1Q9P2E3 1918 aaKnown RBP21.98■■□□□ 1.11
SDF4-206ENST00000478938 KAT6AQ92794 2004 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 C7orf72A4D263 438 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 ATF7P17544 494 aaPredicted RBP21.97■■□□□ 1.11
SDF4-206ENST00000478938 MRPS5P82675 430 aaKnown RBP21.97■■□□□ 1.11
SDF4-206ENST00000478938 FGD3Q5JSP0 725 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 ACAD10Q6JQN1 1059 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 PCYOX1LQ8NBM8 494 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 HPS1Q92902 700 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 C10orf88Q9H8K7 445 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 VPS45Q9NRW7 570 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 GNPTGQ9UJJ9 305 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 KLHL2O95198 593 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 INHBAP08476 426 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 BTDP43251 543 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 ZBTB17Q13105 803 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 ATP13A4Q4VNC1 1196 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 SLC15A4Q8N697 577 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 TRPC4APQ8TEL6 797 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 USP33Q8TEY7 942 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 DDX17Q92841 729 aaKnown RBP21.97■■□□□ 1.11
SDF4-206ENST00000478938 RMND5BQ96G75 393 aaPredicted RBP21.97■■□□□ 1.11
SDF4-206ENST00000478938 KCNK16Q96T55 309 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 ZNF335Q9H4Z2 1342 aaPredicted RBP21.97■■□□□ 1.11
SDF4-206ENST00000478938 XAB2Q9HCS7 855 aaKnown RBP21.97■■□□□ 1.11
SDF4-206ENST00000478938 PLLPQ9Y342 182 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 ARFGEF1Q9Y6D6 1849 aa21.97■■□□□ 1.11
SDF4-206ENST00000478938 ARHGEF37A1IGU5 675 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 ERVV-2B6SEH9 535 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 TRIM49D1C9J1S8 452 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 SGK1O00141 431 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 SNNO75324 88 aaPredicted RBP21.96■■□□□ 1.11
SDF4-206ENST00000478938 MZF1P28698 734 aaPredicted RBP21.96■■□□□ 1.11
SDF4-206ENST00000478938 TRIM72Q6ZMU5 477 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 SETD3Q86TU7 594 aaPredicted RBP21.96■■□□□ 1.11
SDF4-206ENST00000478938 PHTF2Q8N3S3 785 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 PTCD2Q8WV60 388 aaKnown RBP21.96■■□□□ 1.11
SDF4-206ENST00000478938 OLAHQ9NV23 265 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.96■■□□□ 1.11
SDF4-206ENST00000478938 POU2F3Q9UKI9 436 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 ANKRD34BA5PLL1 514 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 GIPC1O14908 333 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 L1CAMP32004 1257 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 PLEKHA7Q6IQ23 1121 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 TANKQ92844 425 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 RIOX1Q9H6W3 641 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 RPF2Q9H7B2 306 aaKnown RBP21.96■■□□□ 1.11
SDF4-206ENST00000478938 APOBEC2Q9Y235 224 aaKnown RBP21.96■■□□□ 1.11
SDF4-206ENST00000478938 CROCCQ5TZA2 2017 aa21.96■■□□□ 1.11
SDF4-206ENST00000478938 A6NL46 340 aa21.95■■□□□ 1.11
SDF4-206ENST00000478938 H3BMQ9 156 aa21.95■■□□□ 1.11
SDF4-206ENST00000478938 ZC3H11AO75152 810 aaKnown RBP eCLIP21.95■■□□□ 1.112e-6■□□□□ 8.9
SDF4-206ENST00000478938 FAM13AO94988 1023 aa21.95■■□□□ 1.11
SDF4-206ENST00000478938 ATP5BP06576 529 aaKnown RBP21.95■■□□□ 1.11
SDF4-206ENST00000478938 PPP2R5DQ14738 602 aa21.95■■□□□ 1.11
SDF4-206ENST00000478938 TRIM16LQ309B1 348 aa21.95■■□□□ 1.11
SDF4-206ENST00000478938 ZFYVE27Q5T4F4 411 aa21.95■■□□□ 1.11
SDF4-206ENST00000478938 IGDCC3Q8IVU1 814 aa21.95■■□□□ 1.11
SDF4-206ENST00000478938 SAMD3Q8N6K7 520 aa21.95■■□□□ 1.11
SDF4-206ENST00000478938 KBTBD7Q8WVZ9 684 aa21.95■■□□□ 1.11
SDF4-206ENST00000478938 COG8Q96MW5 612 aa21.95■■□□□ 1.11
SDF4-206ENST00000478938 DMAC2Q9NW81 257 aa21.95■■□□□ 1.11
SDF4-206ENST00000478938 ERGIC3Q9Y282 383 aa21.95■■□□□ 1.11
SDF4-206ENST00000478938 TCRBV7S3A2A0A539 114 aa21.95■■□□□ 1.1
SDF4-206ENST00000478938 TMEM114B3SHH9 223 aa21.95■■□□□ 1.1
SDF4-206ENST00000478938 ESRRBO95718 433 aa21.95■■□□□ 1.1
SDF4-206ENST00000478938 GNA12Q03113 381 aa21.95■■□□□ 1.1
SDF4-206ENST00000478938 CDK18Q07002 472 aa21.95■■□□□ 1.1
SDF4-206ENST00000478938 FLOT2Q14254 428 aa21.95■■□□□ 1.1
SDF4-206ENST00000478938 AARS2Q5JTZ9 985 aaKnown RBP21.95■■□□□ 1.1
SDF4-206ENST00000478938 KRT80Q6KB66 452 aa21.95■■□□□ 1.1
SDF4-206ENST00000478938 POTEAQ6S8J7 498 aa21.95■■□□□ 1.1
SDF4-206ENST00000478938 LYSMD3Q7Z3D4 306 aa21.95■■□□□ 1.1
SDF4-206ENST00000478938 DNAJC16Q9Y2G8 782 aa21.95■■□□□ 1.1
SDF4-206ENST00000478938 AFG3L2Q9Y4W6 797 aa21.95■■□□□ 1.1
SDF4-206ENST00000478938 CFAP99D6REC4 459 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 PLOD2O00469 737 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 PPP1R11O60927 126 aaPredicted RBP21.94■■□□□ 1.1
SDF4-206ENST00000478938 NCF2P19878 526 aaPredicted RBP21.94■■□□□ 1.1
SDF4-206ENST00000478938 IREB2P48200 963 aaKnown RBP21.94■■□□□ 1.1
SDF4-206ENST00000478938 ESRRGP62508 458 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 STX3Q13277 289 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 MYBPC2Q14324 1141 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 ZBED5Q49AG3 693 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 IL23RQ5VWK5 629 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 RHOT1Q8IXI2 618 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 SLC44A1Q8WWI5 657 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 CTRCQ99895 268 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 CDH19Q9H159 772 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 FARP1Q9Y4F1 1045 aaPredicted RBP21.94■■□□□ 1.1
SDF4-206ENST00000478938 SLIT2O94813 1529 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 EIF3DO15371 548 aaKnown RBP eCLIP21.94■■□□□ 1.1
SDF4-206ENST00000478938 S100BP04271 92 aaPredicted RBP21.94■■□□□ 1.1
SDF4-206ENST00000478938 JAK1P23458 1154 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms