RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 GRAMD4Q6IC98 578 aa14□□□□□ -0.17
VCL-205ENST00000478896 TPGS1Q6ZTW0 290 aa14□□□□□ -0.17
VCL-205ENST00000478896 UNC93AQ86WB7 457 aa14□□□□□ -0.17
VCL-205ENST00000478896 ZMIZ2Q8NF64 920 aa14□□□□□ -0.17
VCL-205ENST00000478896 KCNV2Q8TDN2 545 aa14□□□□□ -0.17
VCL-205ENST00000478896 BBS2Q9BXC9 721 aa14□□□□□ -0.17
VCL-205ENST00000478896 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14□□□□□ -0.179e-7■■■■■ 36.1
VCL-205ENST00000478896 IL37Q9NZH6 218 aa14□□□□□ -0.17
VCL-205ENST00000478896 MBD1Q9UIS9 605 aaPredicted RBP14□□□□□ -0.17
VCL-205ENST00000478896 MAP1BP46821 2468 aaKnown RBP13.99□□□□□ -0.17
VCL-205ENST00000478896 FAM92AA1XBS5 289 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 CALUO43852 315 aaPredicted RBP13.99□□□□□ -0.17
VCL-205ENST00000478896 KLRC4O43908 158 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 RPN1P04843 607 aaKnown RBP13.99□□□□□ -0.17
VCL-205ENST00000478896 SLFN14P0C7P3 912 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 CHRM1P11229 460 aaPredicted RBP13.99□□□□□ -0.17
VCL-205ENST00000478896 CSRP1P21291 193 aaKnown RBP13.99□□□□□ -0.17
VCL-205ENST00000478896 ATP5C1P36542 298 aaKnown RBP13.99□□□□□ -0.17
VCL-205ENST00000478896 ASPAP45381 313 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 DNM1Q05193 864 aaKnown RBP13.99□□□□□ -0.17
VCL-205ENST00000478896 MAP7D1Q3KQU3 841 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 SPDYCQ5MJ68 293 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 ATL3Q6DD88 541 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 SPOPLQ6IQ16 392 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 SDE2Q6IQ49 451 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 SLC36A4Q6YBV0 504 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 SV2AQ7L0J3 742 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 TMEM25Q86YD3 366 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 SLC9A9Q8IVB4 645 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 CHPFQ8IZ52 775 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 C12orf29Q8N999 325 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 DEFB124Q8NES8 71 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 TAF4BQ92750 862 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 WBP2Q969T9 261 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 ERLEC1Q96DZ1 483 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 DUSP9Q99956 384 aaKnown RBP13.99□□□□□ -0.17
VCL-205ENST00000478896 SLC32A1Q9H598 525 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 CSNK1G1Q9HCP0 422 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 TMEM74BQ9NUR3 256 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 CALCOCO1Q9P1Z2 691 aa13.99□□□□□ -0.17
VCL-205ENST00000478896 ADAMTS9Q9P2N4 1935 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 PDXKO00764 312 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 TRIM24O15164 1050 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 CYP26A1O43174 497 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 ACTN4O43707 911 aaKnown RBP13.98□□□□□ -0.17
VCL-205ENST00000478896 KIF20AO95235 890 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 TBX18O95935 607 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 HLA-DRAP01903 254 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 TYRP14679 529 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 ENGP17813 658 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 GABRG2P18507 467 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 ACO1P21399 889 aaKnown RBP13.98□□□□□ -0.17
VCL-205ENST00000478896 ITPKAP23677 461 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 NTSR1P30989 418 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 EGFLAMQ63HQ2 1017 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 UNQ6494/PRO21346Q6UXR6 183 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 CLEC20AQ6ZU45 233 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 HTR3DQ70Z44 454 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 GPRIN1Q7Z2K8 1008 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 CRYBG2Q8N1P7 616 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 HDDC3Q8N4P3 179 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 DEFB119Q8N690 84 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 TMC2Q8TDI7 906 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 SNX21Q969T3 373 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 CCDC47Q96A33 483 aaKnown RBP13.98□□□□□ -0.17
VCL-205ENST00000478896 PAGE5Q96GU1 130 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 GTPBP2Q9BX10 602 aaKnown RBP13.98□□□□□ -0.17
VCL-205ENST00000478896 KCTD10Q9H3F6 313 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 MMRN2Q9H8L6 949 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 DMAC2Q9NW81 257 aa13.98□□□□□ -0.17
VCL-205ENST00000478896 PI4KAP42356 2102 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 C1QTNF9BB2RNN3 333 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 CACNG3O60359 315 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 ASS1P00966 412 aaKnown RBP13.97□□□□□ -0.17
VCL-205ENST00000478896 PROS1P07225 676 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 C1QTNF9P0C862 333 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 PFKFB1P16118 471 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 SPINK2P20155 84 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 HOXD12P35452 270 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 PGFP49763 221 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 VAMP7P51809 220 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 DUOXA1Q1HG43 343 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 SLC23A3Q6PIS1 610 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 CCDC150Q8NCX0 1101 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 BHMTQ93088 406 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 CYFIP2Q96F07 1278 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 NT5C1AQ9BXI3 368 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 KLF16Q9BXK1 252 aaPredicted RBP13.97□□□□□ -0.17
VCL-205ENST00000478896 ADAM33Q9BZ11 813 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 DNAI2Q9GZS0 605 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 CYLDQ9NQC7 956 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 WDR35Q9P2L0 1181 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 PILRBQ9UKJ0 227 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 NUDT5Q9UKK9 219 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 CYP8B1Q9UNU6 501 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 SCML2Q9UQR0 700 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 PCDHA5Q9Y5H7 936 aa13.97□□□□□ -0.17
VCL-205ENST00000478896 A0A1B0GVL5 298 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 A0A1W2PQH9 124 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 IKBKBO14920 756 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms