RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 KCNB2Q92953 911 aa13.06□□□□□ -0.32
HDAC8-217ENST00000478743 BIRC7Q96CA5 298 aa13.06□□□□□ -0.32
HDAC8-217ENST00000478743 TMEM30AQ9NV96 361 aa13.06□□□□□ -0.32
HDAC8-217ENST00000478743 A0A1W2PNU3 283 aaPredicted RBP13.05□□□□□ -0.32
HDAC8-217ENST00000478743 PMS2P1A4D2B8 440 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 KPNA7A9QM74 516 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 NEDD8-MDP1E9PL57 170 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 E9PMD0 336 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 CPLX1O14810 134 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 IRF1P10914 325 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 POU3F2P20265 443 aaPredicted RBP13.05□□□□□ -0.32
HDAC8-217ENST00000478743 PDE6CP51160 858 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 RAD51AP2Q09MP3 1159 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 TEAD4Q15561 434 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 CFAP221Q4G0U5 840 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 SLC39A4Q6P5W5 647 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 TMPRSS6Q8IU80 811 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 SPATA2LQ8IUW3 424 aaPredicted RBP13.05□□□□□ -0.32
HDAC8-217ENST00000478743 ADGRF2Q8IZF7 708 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 SCFD1Q8WVM8 642 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 SIPA1Q96FS4 1042 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 CPSF3Q9UKF6 684 aaKnown RBP13.05□□□□□ -0.32
HDAC8-217ENST00000478743 KIAA1024Q9UPX6 916 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 PCDHB6Q9Y5E3 794 aa13.05□□□□□ -0.32
HDAC8-217ENST00000478743 ITPR2Q14571 2701 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 COCHO43405 550 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 CACNG3O60359 315 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 MT-CO3P00414 261 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 CISD3P0C7P0 127 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 PFKLP17858 780 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 PRKCHP24723 683 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 MCM7P33993 719 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 CACNA2D1P54289 1103 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 WNT7BP56706 349 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 PSMC1P62191 440 aaKnown RBP13.04□□□□□ -0.32
HDAC8-217ENST00000478743 STRN3Q13033 797 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 KCNK18Q7Z418 384 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 MYLPFQ96A32 169 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 SLC6A18Q96N87 628 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 ELF4Q99607 663 aaPredicted RBP13.04□□□□□ -0.32
HDAC8-217ENST00000478743 ACBD6Q9BR61 282 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 NUP58Q9BVL2 599 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 TTLL2Q9BWV7 592 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 OSGEPQ9NPF4 335 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 DDX19AQ9NUU7 478 aaKnown RBP13.04□□□□□ -0.32
HDAC8-217ENST00000478743 DPP3Q9NY33 737 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 TBC1D14Q9P2M4 693 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 RBM19Q9Y4C8 960 aaKnown RBP13.04□□□□□ -0.32
HDAC8-217ENST00000478743 C2CD3Q4AC94 2353 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 ICE1Q9Y2F5 2266 aa13.04□□□□□ -0.32
HDAC8-217ENST00000478743 TISP43B9A030 160 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 GFRA2O00451 464 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 LAD1O00515 517 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 WNT9AO14904 365 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 OGTO15294 1046 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 EFSO43281 561 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 GREM1O60565 184 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 DXOO77932 396 aaKnown RBP13.03□□□□□ -0.32
HDAC8-217ENST00000478743 ITGAVP06756 1048 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 FAM87AP0C7U9 286 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 TYRP14679 529 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 BDNFP23560 247 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 OXTRP30559 389 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 KRT2P35908 639 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 CCT6AP40227 531 aaKnown RBP13.03□□□□□ -0.32
HDAC8-217ENST00000478743 FOSBP53539 338 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 IFRD2Q12894 506 aaPredicted RBP13.03□□□□□ -0.32
HDAC8-217ENST00000478743 TAF10Q12962 218 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 BNIP3Q12983 259 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 SRSF6Q13247 344 aaKnown RBP13.03□□□□□ -0.32
HDAC8-217ENST00000478743 SERINC3Q13530 473 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 TPGS1Q6ZTW0 290 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 C1orf186Q6ZWK4 172 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 PRCCQ92733 491 aaPredicted RBP13.03□□□□□ -0.32
HDAC8-217ENST00000478743 BHMTQ93088 406 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 BICD1Q96G01 975 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 SPATA17Q96L03 361 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 CAAP1Q9H8G2 361 aa13.03□□□□□ -0.32
HDAC8-217ENST00000478743 FSBPO95073 299 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 CDK4P11802 303 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 ABCB4P21439 1286 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 PAX3P23760 479 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 EPHA8P29322 1005 aaPredicted RBP13.02□□□□□ -0.33
HDAC8-217ENST00000478743 MAGEA11P43364 429 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 ACOT2P49753 483 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 SKOR1P84550 965 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 IGFBP7Q16270 282 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 SV2CQ496J9 727 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 RINT1Q6NUQ1 792 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 DENND5BQ6ZUT9 1274 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 KANSL1Q7Z3B3 1105 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 ADAT2Q7Z6V5 191 aaKnown RBP13.02□□□□□ -0.33
HDAC8-217ENST00000478743 SKAP1Q86WV1 359 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 CACTIN-AS1Q8N1I8 211 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 EXTL1Q92935 676 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 OTUB2Q96DC9 234 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 BBS2Q9BXC9 721 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 DPH1Q9BZG8 443 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 CCSER2Q9H7U1 834 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 EBF2Q9HAK2 575 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms