RNA–Protein interactions for RNA: ENST00000477872.1

TMF1-202, Transcript of TATA element modulatory factor 1, humanhuman

TSL 3

Gene TMF1, Length 222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-202ENST00000477872 HIST2H2BCQ6DN03 193 aa2.12□□□□□ -2.07
TMF1-202ENST00000477872 MIER2Q8N344 545 aa2.12□□□□□ -2.07
TMF1-202ENST00000477872 TMEM199Q8N511 208 aa2.12□□□□□ -2.07
TMF1-202ENST00000477872 CELF5Q8N6W0 485 aaKnown RBP2.12□□□□□ -2.07
TMF1-202ENST00000477872 NGDNQ8NEJ9 315 aaKnown RBP2.12□□□□□ -2.07
TMF1-202ENST00000477872 ELP5Q8TE02 316 aa2.12□□□□□ -2.07
TMF1-202ENST00000477872 TMEM171Q8WVE6 324 aa2.12□□□□□ -2.07
TMF1-202ENST00000477872 TRMT61AQ96FX7 289 aaKnown RBP2.12□□□□□ -2.07
TMF1-202ENST00000477872 RBM38Q9H0Z9 239 aaKnown RBP2.12□□□□□ -2.07
TMF1-202ENST00000477872 GBA2Q9HCG7 927 aaPredicted RBP2.12□□□□□ -2.07
TMF1-202ENST00000477872 SARS2Q9NP81 518 aaKnown RBP2.12□□□□□ -2.07
TMF1-202ENST00000477872 FZD3Q9NPG1 666 aa2.12□□□□□ -2.07
TMF1-202ENST00000477872 ZSCAN32Q9NX65 697 aa2.12□□□□□ -2.07
TMF1-202ENST00000477872 ATP8A1Q9Y2Q0 1164 aa2.12□□□□□ -2.07
TMF1-202ENST00000477872 F8W810 466 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 PRPF4O43172 522 aaKnown RBP eCLIP2.11□□□□□ -2.07
TMF1-202ENST00000477872 SPRY2O43597 315 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 DTNBO60941 627 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 LDB3O75112 727 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 PAPSS2O95340 614 aaPredicted RBP2.11□□□□□ -2.07
TMF1-202ENST00000477872 EPHA3P29320 983 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 SLC12A2P55011 1212 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 NKX6-1P78426 367 aaPredicted RBP2.11□□□□□ -2.07
TMF1-202ENST00000477872 DDR1Q08345 913 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 ITKQ08881 620 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 SLC39A5Q6ZMH5 540 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 TRAPPC11Q7Z392 1133 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 PNMA8AQ86V59 439 aaPredicted RBP2.11□□□□□ -2.07
TMF1-202ENST00000477872 SPARTQ8N0X7 666 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 LMO3Q8TAP4 145 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 BPIFB1Q8TDL5 484 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 OIT3Q8WWZ8 545 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 EDC3Q96F86 508 aaKnown RBP2.11□□□□□ -2.07
TMF1-202ENST00000477872 KAZALD1Q96I82 304 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 TM2D2Q9BX73 214 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 RMI1Q9H9A7 625 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 TRIM36Q9NQ86 728 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 MSRB1Q9NZV6 116 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 PCDHA6Q9UN73 950 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 MED16Q9Y2X0 877 aa2.11□□□□□ -2.07
TMF1-202ENST00000477872 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.11□□□□□ -2.07
TMF1-202ENST00000477872 TRBV5-3A0A0A0MS03 114 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.1□□□□□ -2.07
TMF1-202ENST00000477872 FYB1O15117 783 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 KATNA1O75449 491 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 POU2F2P09086 479 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 TCEA1P23193 301 aaKnown RBP2.1□□□□□ -2.07
TMF1-202ENST00000477872 MTHFSP49914 203 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 CDKN1CP49918 316 aaPredicted RBP2.1□□□□□ -2.07
TMF1-202ENST00000477872 GUCY2FP51841 1108 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 TIRAPP58753 221 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 DSCR9P59020 149 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 PTPN21Q16825 1174 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 SLC4A8Q2Y0W8 1093 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 PTCHD3Q3KNS1 767 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 PLA1AQ53H76 456 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 EGFLAMQ63HQ2 1017 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 USP45Q70EL2 814 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 RTL10Q7L3V2 364 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 SKAP1Q86WV1 359 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 DNAJC5GQ8N7S2 189 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 WBP2Q969T9 261 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 MSI2Q96DH6 328 aaKnown RBP2.1□□□□□ -2.07
TMF1-202ENST00000477872 SLC35A4Q96G79 324 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 VN1R3Q9BXE9 311 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 SLC13A1Q9BZW2 595 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 NUAK2Q9H093 628 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 PAPOLBQ9NRJ5 636 aaKnown RBP2.1□□□□□ -2.07
TMF1-202ENST00000477872 HIF1ANQ9NWT6 349 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 PLK2Q9NYY3 685 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 ANAPC4Q9UJX5 808 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 FZD4Q9ULV1 537 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 TMA7Q9Y2S6 64 aaKnown RBP2.1□□□□□ -2.07
TMF1-202ENST00000477872 PRKAB1Q9Y478 270 aa2.1□□□□□ -2.07
TMF1-202ENST00000477872 A0A087WWL8 130 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.09□□□□□ -2.07
TMF1-202ENST00000477872 PODXLO00592 558 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 ATG13O75143 517 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 ACAA1P09110 424 aaPredicted RBP2.09□□□□□ -2.07
TMF1-202ENST00000477872 HOXC6P09630 235 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 RPS6KB1P23443 525 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 HOXA11P31270 313 aaPredicted RBP2.09□□□□□ -2.07
TMF1-202ENST00000477872 UQCRC1P31930 480 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 EVA1CP58658 441 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 KPNB1Q14974 876 aaKnown RBP2.09□□□□□ -2.07
TMF1-202ENST00000477872 MRGPRG-AS1Q2M3A8 158 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 CCDC157Q569K6 752 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 LMBRD2Q68DH5 695 aaPredicted RBP2.09□□□□□ -2.07
TMF1-202ENST00000477872 SRGAP1Q7Z6B7 1085 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 CATIPQ7Z7H3 387 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 MORC1Q86VD1 984 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 SLC15A4Q8N697 577 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 PNPLA1Q8N8W4 532 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 PLBD2Q8NHP8 589 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 MTMR8Q96EF0 704 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 PHF21BQ96EK2 531 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 P2RY11Q96G91 374 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 CDK5RAP3Q96JB5 506 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 MRGPRX1Q96LB2 322 aa2.09□□□□□ -2.07
TMF1-202ENST00000477872 FCRL5Q96RD9 977 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms