RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 HINFPQ9BQA5 517 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 CCDC77Q9BR77 488 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 CALN1Q9BXU9 219 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 MRPL9Q9BYD2 267 aaKnown RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 GOLGA2P5Q9HBQ8 144 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 POPDC2Q9HBU9 364 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 TMBIM4Q9HC24 238 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 NGRNQ9NPE2 291 aaKnown RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.28□□□□□ -1.08
VMA21-203ENST00000477649 TJP2Q9UDY2 1190 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 PCSK1NQ9UHG2 260 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 DNPEPQ9ULA0 475 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 TPX2Q9ULW0 747 aaKnown RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 R3HDM2Q9Y2K5 976 aaKnown RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 FAN1Q9Y2M0 1017 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 ATP8A1Q9Y2Q0 1164 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 RAD54BQ9Y620 910 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 HACD1B0YJ81 288 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 PI4K2BG5E9Z4 385 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 H0YGN5 161 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 SGK1O00141 431 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 APOL1O14791 398 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 MGEA5O60502 916 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 TCEA3O75764 348 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 AP1G2O75843 785 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 OAZ2O95190 189 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 ABHD2P08910 425 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 KRT10P13645 584 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 LCP1P13796 627 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 TCF4P15884 667 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 CYP2C18P33260 490 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 HTR7P34969 479 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 ARL4AP40617 200 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 ITGA8P53708 1063 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 HDAC4P56524 1084 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 BCAR1P56945 870 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 EIF3EP60228 445 aaKnown RBP8.27□□□□□ -1.09
VMA21-203ENST00000477649 SKOR1P84550 965 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 DSC1Q08554 894 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 DPYSL3Q14195 570 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 NOMO1Q15155 1222 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 UAP1Q16222 522 aaPredicted RBP8.27□□□□□ -1.09
VMA21-203ENST00000477649 NFE2Q16621 373 aaPredicted RBP8.27□□□□□ -1.09
VMA21-203ENST00000477649 ARL13BQ3SXY8 428 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 ATP13A4Q4VNC1 1196 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 TIGD5Q53EQ6 642 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 MDH1BQ5I0G3 518 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 CEP85LQ5SZL2 805 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 IZUMO3Q5VZ72 239 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 SLC9A4Q6AI14 798 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 PM20D1Q6GTS8 502 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 OVOS1Q6IE37 1185 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 HIBCHQ6NVY1 386 aaPredicted RBP8.27□□□□□ -1.09
VMA21-203ENST00000477649 PAQR9Q6ZVX9 377 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 BNIPLQ7Z465 357 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 CDKL3Q8IVW4 592 aaPredicted RBP8.27□□□□□ -1.09
VMA21-203ENST00000477649 ABI1Q8IZP0 508 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 RIBC1Q8N443 379 aaPredicted RBP8.27□□□□□ -1.09
VMA21-203ENST00000477649 ACTL9Q8TC94 416 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 ATG4AQ8WYN0 398 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 HSPH1Q92598 858 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 LPPQ93052 612 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 NTAN1Q96AB6 310 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 RTP4Q96DX8 246 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 PCED1BQ96HM7 432 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 CEP295NLQ96MC4 621 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 CFAP57Q96MR6 1250 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 FAM193BQ96PV7 902 aaPredicted RBP8.27□□□□□ -1.09
VMA21-203ENST00000477649 NPY6RQ99463 290 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 HERPUD2Q9BSE4 406 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 BEGAINQ9BUH8 593 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 B3GNT5Q9BYG0 378 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 BRD8Q9H0E9 1235 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 NEUROG2Q9H2A3 272 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 FAM204AQ9H8W3 233 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 CNOT10Q9H9A5 744 aaKnown RBP8.27□□□□□ -1.09
VMA21-203ENST00000477649 PCDH18Q9HCL0 1135 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 DMAP1Q9NPF5 467 aaPredicted RBP8.27□□□□□ -1.09
VMA21-203ENST00000477649 CRTAC1Q9NQ79 661 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 KRT82Q9NSB4 513 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 MIOSQ9NXC5 875 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 NFS1Q9Y697 457 aa8.27□□□□□ -1.09
VMA21-203ENST00000477649 TRIP12Q14669 1992 aaPredicted RBP8.26□□□□□ -1.09
VMA21-203ENST00000477649 SCN1AP35498 2009 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 BCLAF3A2AJT9 711 aaKnown RBP8.26□□□□□ -1.09
VMA21-203ENST00000477649 CASTOR2A6NHX0 329 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 OR6C75A6NL08 312 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 MEIS3P2A8K0S8 358 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 H3BRJ5 948 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 TULP2O00295 520 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 CAPN9O14815 690 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 NCAM2O15394 837 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 RIPK2O43353 540 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 TTC4O95801 387 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 POMCP01189 267 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 RBP3P10745 1247 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 TKTP29401 623 aaKnown RBP8.26□□□□□ -1.09
VMA21-203ENST00000477649 HCAR3P49019 387 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 TKTL1P51854 596 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 DAOAP59103 153 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms