RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ESYT3A0FGR9 886 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 WDR27A2RRH5 827 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 ZBBXA8MT70 800 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 H7C4K7 107 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 PRPSAP2O60256 369 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 HEXIM1O94992 359 aaKnown RBP15.08■□□□□ 0.01
COL4A6-206ENST00000477085 GJB5O95377 273 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 LTFP02788 710 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 MAGEA11P43364 429 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 SULT1E1P49888 294 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 COPS2P61201 443 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 USP46P62068 366 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 HTRA4P83105 476 aaPredicted RBP15.08■□□□□ 0.01
COL4A6-206ENST00000477085 BSPRYQ5W0U4 402 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 SLC8B1Q6J4K2 584 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 VSTM1Q6UX27 236 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 CCNI2Q6ZMN8 369 aaPredicted RBP15.08■□□□□ 0.01
COL4A6-206ENST00000477085 STRADAQ7RTN6 431 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 SCD5Q86SK9 330 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 KCTD6Q8NC69 237 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 ADAM32Q8TC27 787 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 PIK3R5Q8WYR1 880 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 IRGQQ8WZA9 623 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 C8orf48Q96LL4 319 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 YME1L1Q96TA2 773 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 SNRNP25Q9BV90 132 aaKnown RBP15.08■□□□□ 0.01
COL4A6-206ENST00000477085 DCLK3Q9C098 648 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 GDF3Q9NR23 364 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 TMPRSS4Q9NRS4 437 aa15.08■□□□□ 0.01
COL4A6-206ENST00000477085 GOLGA6L10A0A0M3HER8 536 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 I6L893 689 aaPredicted RBP15.08■□□□□ 0
COL4A6-206ENST00000477085 C2CD2LO14523 706 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 SEC31AO94979 1220 aaKnown RBP15.08■□□□□ 0
COL4A6-206ENST00000477085 SOD2P04179 222 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 NCAM1P13591 858 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 CPB1P15086 417 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 CHRNA3P32297 505 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 COILP38432 576 aaPredicted RBP15.08■□□□□ 0
COL4A6-206ENST00000477085 GUCY2DQ02846 1103 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 DUSP4Q13115 394 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 SNX1Q13596 522 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 DPYSL3Q14195 570 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 PPP2R5EQ16537 467 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 BOLA3Q53S33 107 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 GSPT2Q8IYD1 628 aaKnown RBP15.08■□□□□ 0
COL4A6-206ENST00000477085 CASKIN2Q8WXE0 1202 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 EPB41L5Q9HCM4 733 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 ANLNQ9NQW6 1124 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 PIGVQ9NUD9 493 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 OSER1Q9NX31 292 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 MTMR10Q9NXD2 777 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 PRKAG2Q9UGJ0 569 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 PCYOX1Q9UHG3 505 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 MTUS1Q9ULD2 1270 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 BACE2Q9Y5Z0 518 aa15.08■□□□□ 0
COL4A6-206ENST00000477085 M0QYT0 321 aa15.07■□□□□ 0
COL4A6-206ENST00000477085 LAG3P18627 525 aa15.07■□□□□ 0
COL4A6-206ENST00000477085 OR1D2P34982 312 aa15.07■□□□□ 0
COL4A6-206ENST00000477085 ROR1Q01973 937 aa15.07■□□□□ 0
COL4A6-206ENST00000477085 IFRD2Q12894 506 aaPredicted RBP15.07■□□□□ 0
COL4A6-206ENST00000477085 PSMD5Q16401 504 aa15.07■□□□□ 0
COL4A6-206ENST00000477085 CCDC137Q6PK04 289 aaKnown RBP15.07■□□□□ 0
COL4A6-206ENST00000477085 FAM131BQ86XD5 332 aa15.07■□□□□ 0
COL4A6-206ENST00000477085 FAM71BQ8TC56 605 aa15.07■□□□□ 0
COL4A6-206ENST00000477085 TEKT4Q8WW24 435 aa15.07■□□□□ 0
COL4A6-206ENST00000477085 TRIM51Q9BSJ1 452 aa15.07■□□□□ 0
COL4A6-206ENST00000477085 NMUR1Q9HB89 426 aa15.07■□□□□ 0
COL4A6-206ENST00000477085 WDR6Q9NNW5 1121 aaKnown RBP15.07■□□□□ 0
COL4A6-206ENST00000477085 SPG21Q9NZD8 308 aa15.07■□□□□ 0
COL4A6-206ENST00000477085 IL37Q9NZH6 218 aa15.07■□□□□ 0
COL4A6-206ENST00000477085 SAE1Q9UBE0 346 aaPredicted RBP15.07■□□□□ 0
COL4A6-206ENST00000477085 PATJQ8NI35 1801 aa15.07■□□□□ 0
COL4A6-206ENST00000477085 SYNJ2BP-COX16A0A087WUM0 186 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 CCDC151A5D8V7 595 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 MDM4O15151 490 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 HAPLN1P10915 354 aaPredicted RBP15.06■□□□□ 0
COL4A6-206ENST00000477085 L1CAMP32004 1257 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 CARSP49589 748 aaKnown RBP15.06■□□□□ 0
COL4A6-206ENST00000477085 CDH6P55285 790 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 DR1Q01658 176 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 DSG1Q02413 1049 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 NME3Q13232 169 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 BRD3Q15059 726 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 ERMARDQ5T6L9 678 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 DDX42Q86XP3 938 aaKnown RBP eCLIP15.06■□□□□ 0
COL4A6-206ENST00000477085 NUP93Q8N1F7 819 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 PYROXD2Q8N2H3 581 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 SLC7A14Q8TBB6 771 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 OXCT2Q9BYC2 517 aaPredicted RBP15.06■□□□□ 0
COL4A6-206ENST00000477085 PCDH18Q9HCL0 1135 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.06■□□□□ 0
COL4A6-206ENST00000477085 COX16Q9P0S2 106 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 CAPN9O14815 690 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 TRIM66O15016 1216 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 TJP3O95049 919 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 RDXP35241 583 aaKnown RBP15.06■□□□□ 0
COL4A6-206ENST00000477085 EIF4EBP2Q13542 120 aaPredicted RBP15.06■□□□□ 0
COL4A6-206ENST00000477085 MTMR3Q13615 1198 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 CCNG2Q16589 344 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 BEND6Q5SZJ8 279 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms