RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 HSPH1Q92598 858 aa30.11■■■□□ 2.41
VEGFA-211ENST00000476772 EDEM1Q92611 657 aa30.11■■■□□ 2.41
VEGFA-211ENST00000476772 ZBP1Q9H171 429 aa30.11■■■□□ 2.41
VEGFA-211ENST00000476772 MRPL17Q9NRX2 175 aaKnown RBP30.11■■■□□ 2.41
VEGFA-211ENST00000476772 AFF4Q9UHB7 1163 aaKnown RBP30.11■■■□□ 2.41
VEGFA-211ENST00000476772 RALAP11233 206 aa30.11■■■□□ 2.41
VEGFA-211ENST00000476772 USP46P62068 366 aa30.11■■■□□ 2.41
VEGFA-211ENST00000476772 C9orf50Q5SZB4 431 aa30.11■■■□□ 2.41
VEGFA-211ENST00000476772 ZDHHC14Q8IZN3 488 aa30.11■■■□□ 2.41
VEGFA-211ENST00000476772 OSBPL8Q9BZF1 889 aa30.11■■■□□ 2.41
VEGFA-211ENST00000476772 STK39Q9UEW8 545 aa30.11■■■□□ 2.41
VEGFA-211ENST00000476772 PLXNA3P51805 1871 aa30.1■■■□□ 2.41
VEGFA-211ENST00000476772 FSCN2O14926 492 aa30.1■■■□□ 2.41
VEGFA-211ENST00000476772 RHOXF2BP0C7M4 288 aa30.1■■■□□ 2.41
VEGFA-211ENST00000476772 SPOCD1Q6ZMY3 1216 aa30.1■■■□□ 2.41
VEGFA-211ENST00000476772 BNIPLQ7Z465 357 aa30.1■■■□□ 2.41
VEGFA-211ENST00000476772 SPATA17Q96L03 361 aa30.1■■■□□ 2.41
VEGFA-211ENST00000476772 RHOXF2Q9BQY4 288 aa30.1■■■□□ 2.41
VEGFA-211ENST00000476772 C3orf70A6NLC5 250 aaPredicted RBP30.09■■■□□ 2.41
VEGFA-211ENST00000476772 CCDC188H7C350 402 aa30.09■■■□□ 2.41
VEGFA-211ENST00000476772 M0QYT0 321 aa30.09■■■□□ 2.41
VEGFA-211ENST00000476772 ABLIM3O94929 683 aa30.09■■■□□ 2.41
VEGFA-211ENST00000476772 YWHAGP61981 247 aaKnown RBP eCLIP30.09■■■□□ 2.41
VEGFA-211ENST00000476772 RPL10AP62906 217 aaKnown RBP30.09■■■□□ 2.41
VEGFA-211ENST00000476772 DENND5BQ6ZUT9 1274 aa30.09■■■□□ 2.41
VEGFA-211ENST00000476772 KLHL7Q8IXQ5 586 aa30.09■■■□□ 2.41
VEGFA-211ENST00000476772 ZNF461Q8TAF7 563 aa30.09■■■□□ 2.41
VEGFA-211ENST00000476772 KRT12Q99456 494 aa30.09■■■□□ 2.41
VEGFA-211ENST00000476772 HEMGNQ9BXL5 484 aa30.09■■■□□ 2.41
VEGFA-211ENST00000476772 FBXO44Q9H4M3 255 aa30.09■■■□□ 2.41
VEGFA-211ENST00000476772 IL37Q9NZH6 218 aa30.09■■■□□ 2.41
VEGFA-211ENST00000476772 SCML2Q9UQR0 700 aa30.09■■■□□ 2.41
VEGFA-211ENST00000476772 ENDOD1O94919 500 aa30.08■■■□□ 2.41
VEGFA-211ENST00000476772 CTSAP10619 480 aa30.08■■■□□ 2.41
VEGFA-211ENST00000476772 ATF6P18850 670 aa30.08■■■□□ 2.41
VEGFA-211ENST00000476772 KDELR1P24390 212 aa30.08■■■□□ 2.41
VEGFA-211ENST00000476772 CTNNB1P35222 781 aa30.08■■■□□ 2.41
VEGFA-211ENST00000476772 CETN2P41208 172 aa30.08■■■□□ 2.41
VEGFA-211ENST00000476772 PGFP49763 221 aa30.08■■■□□ 2.41
VEGFA-211ENST00000476772 COPS2P61201 443 aa30.08■■■□□ 2.41
VEGFA-211ENST00000476772 SIX1Q15475 284 aaPredicted RBP30.08■■■□□ 2.41
VEGFA-211ENST00000476772 TPGS2Q68CL5 300 aa30.08■■■□□ 2.41
VEGFA-211ENST00000476772 SCD5Q86SK9 330 aa30.08■■■□□ 2.41
VEGFA-211ENST00000476772 CMASQ8NFW8 434 aaPredicted RBP30.08■■■□□ 2.41
VEGFA-211ENST00000476772 SLC7A14Q8TBB6 771 aa30.08■■■□□ 2.41
VEGFA-211ENST00000476772 SNRNP25Q9BV90 132 aaKnown RBP30.08■■■□□ 2.41
VEGFA-211ENST00000476772 STAU2Q9NUL3 570 aaKnown RBP eCLIP30.08■■■□□ 2.41
VEGFA-211ENST00000476772 GPATCH2LQ9NWQ4 482 aa30.08■■■□□ 2.41
VEGFA-211ENST00000476772 GREB1Q4ZG55 1949 aa30.08■■■□□ 2.41
VEGFA-211ENST00000476772 SYNJ2BP-COX16A0A087WUM0 186 aa30.07■■■□□ 2.41
VEGFA-211ENST00000476772 GOLGA6L10A0A0M3HER8 536 aa30.07■■■□□ 2.41
VEGFA-211ENST00000476772 LILRB3O75022 631 aa30.07■■■□□ 2.41
VEGFA-211ENST00000476772 SEC24AO95486 1093 aa30.07■■■□□ 2.41
VEGFA-211ENST00000476772 RDXP35241 583 aaKnown RBP30.07■■■□□ 2.41
VEGFA-211ENST00000476772 BMPR1AP36894 532 aa30.07■■■□□ 2.41
VEGFA-211ENST00000476772 MAGEA10P43363 369 aaPredicted RBP30.07■■■□□ 2.41
VEGFA-211ENST00000476772 RAB33AQ14088 237 aa30.07■■■□□ 2.41
VEGFA-211ENST00000476772 BOLA3Q53S33 107 aa30.07■■■□□ 2.41
VEGFA-211ENST00000476772 GPR65Q8IYL9 337 aa30.07■■■□□ 2.41
VEGFA-211ENST00000476772 ADAM32Q8TC27 787 aa30.07■■■□□ 2.41
VEGFA-211ENST00000476772 TEKT4Q8WW24 435 aa30.07■■■□□ 2.41
VEGFA-211ENST00000476772 TRIM62Q9BVG3 475 aa30.07■■■□□ 2.41
VEGFA-211ENST00000476772 DDX47Q9H0S4 455 aaKnown RBP30.07■■■□□ 2.41
VEGFA-211ENST00000476772 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP30.07■■■□□ 2.41
VEGFA-211ENST00000476772 COX16Q9P0S2 106 aa30.07■■■□□ 2.41
VEGFA-211ENST00000476772 LINC01553A4QN01 128 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 CD48P09326 243 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 KRT10P13645 584 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 ATF2P15336 505 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 CDKN2BP42772 138 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 NME3Q13232 169 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 MTMR3Q13615 1198 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 BEND5Q7L4P6 421 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 FAM131BQ86XD5 332 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 PRELID2Q8N945 189 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 KCTD6Q8NC69 237 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 GIPC2Q8TF65 315 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 LRRC1Q9BTT6 524 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 ANKZF1Q9H8Y5 726 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 NMUR1Q9HB89 426 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 RRN3Q9NYV6 651 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 FNIP2Q9P278 1114 aa30.07■■■□□ 2.4
VEGFA-211ENST00000476772 hCG_1818297A0A087WSY0 165 aa30.06■■■□□ 2.4
VEGFA-211ENST00000476772 A0A1W2PQH9 124 aa30.06■■■□□ 2.4
VEGFA-211ENST00000476772 RTN3O95197 1032 aaPredicted RBP30.06■■■□□ 2.4
VEGFA-211ENST00000476772 CA8P35219 290 aa30.06■■■□□ 2.4
VEGFA-211ENST00000476772 PTPN7P35236 360 aa30.06■■■□□ 2.4
VEGFA-211ENST00000476772 TUFMP49411 452 aaKnown RBP30.06■■■□□ 2.4
VEGFA-211ENST00000476772 MRPS25P82663 173 aaKnown RBP30.06■■■□□ 2.4
VEGFA-211ENST00000476772 DEUP1Q05D60 604 aa30.06■■■□□ 2.4
VEGFA-211ENST00000476772 KLF1Q13351 362 aaPredicted RBP30.06■■■□□ 2.4
VEGFA-211ENST00000476772 ZC3H12AQ5D1E8 599 aaKnown RBP30.06■■■□□ 2.4
VEGFA-211ENST00000476772 BTBD8Q5XKL5 378 aa30.06■■■□□ 2.4
VEGFA-211ENST00000476772 KAZNQ674X7 775 aa30.06■■■□□ 2.4
VEGFA-211ENST00000476772 GPR161Q8N6U8 529 aaKnown RBP30.06■■■□□ 2.4
VEGFA-211ENST00000476772 CCDC185Q8N715 623 aa30.06■■■□□ 2.4
VEGFA-211ENST00000476772 ABCC13Q9NSE7 274 aa30.06■■■□□ 2.4
VEGFA-211ENST00000476772 PIGVQ9NUD9 493 aa30.06■■■□□ 2.4
VEGFA-211ENST00000476772 MTUS1Q9ULD2 1270 aa30.06■■■□□ 2.4
VEGFA-211ENST00000476772 ZNF638Q14966 1978 aaKnown RBP30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 840.4 ms