RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 FAM86C1Q9NVL1 165 aa14.36□□□□□ -0.11
RAB5A-208ENST00000476544 POLR3BQ9NW08 1133 aaPredicted RBP14.36□□□□□ -0.11
RAB5A-208ENST00000476544 CLIC5Q9NZA1 410 aa14.36□□□□□ -0.11
RAB5A-208ENST00000476544 LIMA1Q9UHB6 759 aaKnown RBP14.36□□□□□ -0.11
RAB5A-208ENST00000476544 NAGPAQ9UK23 515 aa14.36□□□□□ -0.11
RAB5A-208ENST00000476544 ZFHX2Q9C0A1 2572 aaPredicted RBP14.35□□□□□ -0.11
RAB5A-208ENST00000476544 PTPRDP23468 1912 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 EPHB6O15197 1021 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 LETM1O95202 739 aaPredicted RBP14.35□□□□□ -0.11
RAB5A-208ENST00000476544 CYP17A1P05093 508 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 SETSIPP0DME0 302 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 TDGF1P13385 188 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 ATP1A3P13637 1013 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 PTPN5P54829 565 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 YWHAGP61981 247 aaKnown RBP eCLIP14.35□□□□□ -0.11
RAB5A-208ENST00000476544 STX1AQ16623 288 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 BSPRYQ5W0U4 402 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 Q6ZNB5 142 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 Q6ZS52 159 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 TMEM25Q86YD3 366 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 DHX40Q8IX18 779 aaKnown RBP14.35□□□□□ -0.11
RAB5A-208ENST00000476544 SCUBE3Q8IX30 993 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 SCML4Q8N228 414 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 CLEC4CQ8WTT0 213 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 HSFY1Q96LI6 401 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 PRRX2Q99811 253 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 SLC4A5Q9BY07 1137 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 DNAI2Q9GZS0 605 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 HESX1Q9UBX0 185 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 TJP2Q9UDY2 1190 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 DNMT3LQ9UJW3 386 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 SIK3Q9Y2K2 1263 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 MRPS17Q9Y2R5 130 aaKnown RBP14.35□□□□□ -0.11
RAB5A-208ENST00000476544 FHOD1Q9Y613 1164 aa14.35□□□□□ -0.11
RAB5A-208ENST00000476544 STC2O76061 302 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 EGFP01133 1207 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 SP9P0CG40 484 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 LCP1P13796 627 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 TRIM21P19474 475 aaKnown RBP14.34□□□□□ -0.11
RAB5A-208ENST00000476544 PLA2G5P39877 138 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 IFNAR2P48551 515 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 DAOAP59103 153 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 MYL5Q02045 173 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 ADIGQ0VDE8 80 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 DRAP1Q14919 205 aaPredicted RBP14.34□□□□□ -0.11
RAB5A-208ENST00000476544 ANO6Q4KMQ2 910 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 C10orf120Q5SQS8 335 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 LY6G5CQ5SRR4 150 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 TMEM110Q86TL2 294 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 SLC47A2Q86VL8 602 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 C12orf40Q86WS4 652 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 NELL1Q92832 810 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 MSANTD3Q96H12 275 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 GANQ9H2C0 597 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 GREB1Q4ZG55 1949 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 COL4A2P08572 1712 aa14.34□□□□□ -0.11
RAB5A-208ENST00000476544 A0A0A0MRY4 1105 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 M0QYV0 167 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 TRIM24O15164 1050 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 NCAM2O15394 837 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 IRF1P10914 325 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 UCHL3P15374 230 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 RFX1P22670 979 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 PSEN1P49768 467 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 COPB1P53618 953 aaKnown RBP14.33□□□□□ -0.12
RAB5A-208ENST00000476544 IQCB1Q15051 598 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 STILQ15468 1287 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 TSSK4Q6SA08 328 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 STK32AQ8WU08 396 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 DDX1Q92499 740 aaKnown RBP14.33□□□□□ -0.12
RAB5A-208ENST00000476544 EDEM1Q92611 657 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 ATP2A3Q93084 1043 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 LRRC4Q9HBW1 653 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 CNGB3Q9NQW8 809 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 SPATA6Q9NWH7 488 aaPredicted RBP14.33□□□□□ -0.12
RAB5A-208ENST00000476544 HCN2Q9UL51 889 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 DMDP11532 3685 aa14.33□□□□□ -0.12
RAB5A-208ENST00000476544 K7EQS6 105 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 PAPSS1O43252 624 aaPredicted RBP14.32□□□□□ -0.12
RAB5A-208ENST00000476544 GNA15P30679 374 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 USP8P40818 1118 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 SLC8A3P57103 927 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 EFEMP1Q12805 493 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 TAF5Q15542 800 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 KLHL40Q2TBA0 621 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 SMYD5Q6GMV2 418 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 DDX42Q86XP3 938 aaKnown RBP eCLIP14.32□□□□□ -0.12
RAB5A-208ENST00000476544 MIB1Q86YT6 1006 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 ETFBKMTQ8IXQ9 262 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 PHTF2Q8N3S3 785 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 CPA6Q8N4T0 437 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 AOPEPQ8N6M6 819 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 ATOH1Q92858 354 aaPredicted RBP14.32□□□□□ -0.12
RAB5A-208ENST00000476544 P2RY13Q9BPV8 354 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 LSM14BQ9BX40 385 aaKnown RBP14.32□□□□□ -0.12
RAB5A-208ENST00000476544 PLCB1Q9NQ66 1216 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 TBC1D14Q9P2M4 693 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 SFMBT1Q9UHJ3 866 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 VPS13AQ96RL7 3174 aa14.32□□□□□ -0.12
RAB5A-208ENST00000476544 PIEZO1Q92508 2521 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms