RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 ZMIZ2Q8NF64 920 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 C2orf15Q8WU43 125 aaKnown RBP12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 SLC2A13Q96QE2 648 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 TMEM209Q96SK2 561 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 ACBD3Q9H3P7 528 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 EPB41L5Q9HCM4 733 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 FAM114A2Q9NRY5 505 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 ABI2Q9NYB9 513 aaPredicted RBP12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 HHLA1C9JL84 531 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 ZBED1O96006 694 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 LTFP02788 710 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 LAG3P18627 525 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 IL1R2P27930 398 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 RDXP35241 583 aaKnown RBP12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 GRIK1P39086 918 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 MAGEA11P43364 429 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 TNNT3P45378 269 aaPredicted RBP12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 AIF1P55008 147 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 CDH6P55285 790 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 WDR5P61964 334 aaKnown RBP12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 PPIGQ13427 754 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 TFDP2Q14188 446 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 MRPL58Q14197 206 aaKnown RBP12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 PPP1R7Q15435 360 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 TAF5Q15542 800 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 CCNG2Q16589 344 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 DCAF6Q58WW2 860 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 KAZNQ674X7 775 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 EMBQ6PCB8 327 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 CCNI2Q6ZMN8 369 aaPredicted RBP12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 JAMLQ86YT9 394 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 RFX6Q8HWS3 928 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 ARFGAP1Q8N6T3 406 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 CMASQ8NFW8 434 aaPredicted RBP12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 SPPL2BQ8TCT7 592 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 HDAC7Q8WUI4 952 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 RAPGEF5Q92565 580 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 CENPIQ92674 756 aaPredicted RBP12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 KHSRPQ92945 711 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 SLCO2A1Q92959 643 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 TOP1MTQ969P6 601 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 FAM122AQ96E09 287 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 CCDC114Q96M63 670 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 ZNF558Q96NG5 402 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 PEBP4Q96S96 227 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 KCNK16Q96T55 309 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 TTPALQ9BTX7 342 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 C11orf84Q9BUA3 381 aaPredicted RBP12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 HEMGNQ9BXL5 484 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 CALN1Q9BXU9 219 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 MAK16Q9BXY0 300 aaKnown RBP12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 RHOBTB2Q9BYZ6 727 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 GPR62Q9BZJ7 368 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 DCLK3Q9C098 648 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 IL23AQ9NPF7 189 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 TMLHEQ9NVH6 421 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 RAPGEFL1Q9UHV5 662 aa12.93□□□□□ -0.34
CDKAL1-203ENST00000476517 TCRBV7S2A1N4TA0A589 114 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 TRIM43BA6NCK2 446 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 ZNF487B1APH4 448 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 ZMYND10O75800 440 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 OR4Q2P0C623 313 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 CSF2RAP15509 400 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 CACNA2D1P54289 1103 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 HDAC4P56524 1084 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 HLTFQ14527 1009 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 TAZQ16635 292 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 USP41Q3LFD5 358 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 ATP13A4Q4VNC1 1196 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 KCNT1Q5JUK3 1230 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 TXNRD3NBQ6F5E7 133 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 BBS12Q6ZW61 710 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 SND1Q7KZF4 910 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 GPRIN1Q7Z2K8 1008 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 HDXQ7Z353 690 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 LRRTM3Q86VH5 581 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 PSTKQ8IV42 348 aaKnown RBP12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 SCN4BQ8IWT1 228 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 CCHCR1Q8TD31 782 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 TRIM43Q96BQ3 446 aaPredicted RBP12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 ACSF2Q96CM8 615 aaPredicted RBP12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 C8orf48Q96LL4 319 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 NPY6RQ99463 290 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 ZNF670Q9BS34 389 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 SNRNP25Q9BV90 132 aaKnown RBP12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 FAM129AQ9BZQ8 928 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 FBXO44Q9H4M3 255 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 FAM204AQ9H8W3 233 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 PLXNA4Q9HCM2 1894 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 TMEM51Q9NW97 253 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 NR2E1Q9Y466 385 aa12.92□□□□□ -0.34
CDKAL1-203ENST00000476517 C3orf70A6NLC5 250 aaPredicted RBP12.91□□□□□ -0.34
CDKAL1-203ENST00000476517 M0QYT0 321 aa12.91□□□□□ -0.34
CDKAL1-203ENST00000476517 NDC80O14777 642 aa12.91□□□□□ -0.34
CDKAL1-203ENST00000476517 F9P00740 461 aa12.91□□□□□ -0.34
CDKAL1-203ENST00000476517 USP17L7P0C7H9 530 aa12.91□□□□□ -0.34
CDKAL1-203ENST00000476517 KRT10P13645 584 aa12.91□□□□□ -0.34
CDKAL1-203ENST00000476517 PTGIRP43119 386 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms