RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 YAF2Q8IY57 180 aa30.99■■■□□ 2.55
HOXB3-208ENST00000476342 CPQQ9Y646 472 aa30.99■■■□□ 2.55
HOXB3-208ENST00000476342 TNFRSF10AO00220 468 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 LTFP02788 710 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 E4F1Q66K89 784 aaPredicted RBP30.98■■■□□ 2.55
HOXB3-208ENST00000476342 DDX42Q86XP3 938 aaKnown RBP eCLIP30.98■■■□□ 2.55
HOXB3-208ENST00000476342 UBALD2Q8IYN6 164 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 FAM149B1Q96BN6 582 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 RSPRY1Q96DX4 576 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 TRIM62Q9BVG3 475 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 TRMT61BQ9BVS5 477 aaKnown RBP30.98■■■□□ 2.55
HOXB3-208ENST00000476342 OLA1Q9NTK5 396 aaKnown RBP30.98■■■□□ 2.55
HOXB3-208ENST00000476342 DNMT3LQ9UJW3 386 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 DCXO43602 365 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 SRFP11831 508 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 TCF3P15923 654 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 FCHO2Q0JRZ9 810 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 GRM2Q14416 872 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 ZDHHC17Q8IUH5 632 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 RNF139Q8WU17 664 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 CPA5Q8WXQ8 436 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 MRFAP1L1Q96HT8 127 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 HAUS4Q9H6D7 363 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 THG1LQ9NWX6 298 aaKnown RBP30.98■■■□□ 2.55
HOXB3-208ENST00000476342 TJP2Q9UDY2 1190 aa30.98■■■□□ 2.55
HOXB3-208ENST00000476342 BZW2Q9Y6E2 419 aaKnown RBP30.98■■■□□ 2.55
HOXB3-208ENST00000476342 ALADP13716 330 aa30.97■■■□□ 2.55
HOXB3-208ENST00000476342 TNFAIP3P21580 790 aa30.97■■■□□ 2.55
HOXB3-208ENST00000476342 ZNF75DP51815 510 aa30.97■■■□□ 2.55
HOXB3-208ENST00000476342 USP4Q13107 963 aa30.97■■■□□ 2.55
HOXB3-208ENST00000476342 ZNF77Q15935 545 aa30.97■■■□□ 2.55
HOXB3-208ENST00000476342 OR6B2Q6IFH4 312 aa30.97■■■□□ 2.55
HOXB3-208ENST00000476342 TOGARAM2Q6ZUX3 1019 aa30.97■■■□□ 2.55
HOXB3-208ENST00000476342 TTC16Q8NEE8 873 aa30.97■■■□□ 2.55
HOXB3-208ENST00000476342 SH3RF2Q8TEC5 729 aa30.97■■■□□ 2.55
HOXB3-208ENST00000476342 C18orf8Q96DM3 657 aa30.97■■■□□ 2.55
HOXB3-208ENST00000476342 SMPD4Q9NXE4 827 aa30.97■■■□□ 2.55
HOXB3-208ENST00000476342 NUDT5Q9UKK9 219 aa30.97■■■□□ 2.55
HOXB3-208ENST00000476342 TBX18O95935 607 aa30.96■■■□□ 2.55
HOXB3-208ENST00000476342 ERBB2P04626 1255 aa30.96■■■□□ 2.55
HOXB3-208ENST00000476342 UNGP13051 313 aaPredicted RBP30.96■■■□□ 2.55
HOXB3-208ENST00000476342 NSFP46459 744 aaKnown RBP30.96■■■□□ 2.55
HOXB3-208ENST00000476342 GOLGA8FQ08AF8 430 aa30.96■■■□□ 2.55
HOXB3-208ENST00000476342 GOLGA8DPQ0D2H9 430 aa30.96■■■□□ 2.55
HOXB3-208ENST00000476342 CLEC16AQ2KHT3 1053 aa30.96■■■□□ 2.55
HOXB3-208ENST00000476342 TDRD12Q587J7 1177 aaKnown RBP30.96■■■□□ 2.55
HOXB3-208ENST00000476342 HFE2Q6ZVN8 426 aa30.96■■■□□ 2.55
HOXB3-208ENST00000476342 TMC6Q7Z403 805 aa30.96■■■□□ 2.55
HOXB3-208ENST00000476342 PCDHB18PQ96TA0 734 aa30.96■■■□□ 2.55
HOXB3-208ENST00000476342 LEFTY2O00292 366 aa30.95■■■□□ 2.54
HOXB3-208ENST00000476342 GDI1P31150 447 aa30.95■■■□□ 2.54
HOXB3-208ENST00000476342 GABRB2P47870 512 aa30.95■■■□□ 2.54
HOXB3-208ENST00000476342 CENPCQ03188 943 aa30.95■■■□□ 2.54
HOXB3-208ENST00000476342 ARHGAP29Q52LW3 1261 aa30.95■■■□□ 2.54
HOXB3-208ENST00000476342 EFHC1Q5JVL4 640 aa30.95■■■□□ 2.54
HOXB3-208ENST00000476342 CC2D1AQ6P1N0 951 aaPredicted RBP30.95■■■□□ 2.54
HOXB3-208ENST00000476342 EDEM1Q92611 657 aa30.95■■■□□ 2.54
HOXB3-208ENST00000476342 BRD9Q9H8M2 597 aa30.95■■■□□ 2.54
HOXB3-208ENST00000476342 STRIP2Q9ULQ0 834 aa30.95■■■□□ 2.54
HOXB3-208ENST00000476342 ZNF263O14978 683 aa30.94■■■□□ 2.54
HOXB3-208ENST00000476342 CHADO15335 359 aa30.94■■■□□ 2.54
HOXB3-208ENST00000476342 NARSO43776 548 aaKnown RBP30.94■■■□□ 2.54
HOXB3-208ENST00000476342 EFEMP1Q12805 493 aa30.94■■■□□ 2.54
HOXB3-208ENST00000476342 MTF1Q14872 753 aa30.94■■■□□ 2.54
HOXB3-208ENST00000476342 PPP1R2P3Q6NXS1 205 aa30.94■■■□□ 2.54
HOXB3-208ENST00000476342 FAM183BPQ6ZVS7 135 aa30.94■■■□□ 2.54
HOXB3-208ENST00000476342 IRF7Q92985 503 aa30.94■■■□□ 2.54
HOXB3-208ENST00000476342 ZFRQ96KR1 1074 aaKnown RBP30.94■■■□□ 2.54
HOXB3-208ENST00000476342 LRRC3BQ96PB8 259 aa30.94■■■□□ 2.54
HOXB3-208ENST00000476342 SYT11Q9BT88 431 aa30.94■■■□□ 2.54
HOXB3-208ENST00000476342 POPDC2Q9HBU9 364 aa30.94■■■□□ 2.54
HOXB3-208ENST00000476342 SLC2A4RGQ9NR83 387 aa30.94■■■□□ 2.54
HOXB3-208ENST00000476342 ASNSD1Q9NWL6 643 aa30.94■■■□□ 2.54
HOXB3-208ENST00000476342 RASAL2Q9UJF2 1139 aa30.94■■■□□ 2.54
HOXB3-208ENST00000476342 KIF26AQ9ULI4 1882 aaPredicted RBP30.94■■■□□ 2.54
HOXB3-208ENST00000476342 MDM4O15151 490 aa30.93■■■□□ 2.54
HOXB3-208ENST00000476342 SERPING1P05155 500 aa30.93■■■□□ 2.54
HOXB3-208ENST00000476342 GLI1P08151 1106 aa30.93■■■□□ 2.54
HOXB3-208ENST00000476342 SKILP12757 684 aa30.93■■■□□ 2.54
HOXB3-208ENST00000476342 GPC5P78333 572 aa30.93■■■□□ 2.54
HOXB3-208ENST00000476342 ZXDAP98168 799 aa30.93■■■□□ 2.54
HOXB3-208ENST00000476342 ZXDBP98169 803 aa30.93■■■□□ 2.54
HOXB3-208ENST00000476342 PFKPQ01813 784 aa30.93■■■□□ 2.54
HOXB3-208ENST00000476342 TSR1Q2NL82 804 aaKnown RBP30.93■■■□□ 2.54
HOXB3-208ENST00000476342 OLFML1Q6UWY5 402 aa30.93■■■□□ 2.54
HOXB3-208ENST00000476342 BEND5Q7L4P6 421 aa30.93■■■□□ 2.54
HOXB3-208ENST00000476342 ZNF571Q7Z3V5 609 aaPredicted RBP30.93■■■□□ 2.54
HOXB3-208ENST00000476342 KIAA1958Q8N8K9 716 aa30.93■■■□□ 2.54
HOXB3-208ENST00000476342 OR8K1Q8NGG5 319 aa30.93■■■□□ 2.54
HOXB3-208ENST00000476342 CAPN9O14815 690 aa30.92■■■□□ 2.54
HOXB3-208ENST00000476342 NCAM1P13591 858 aa30.92■■■□□ 2.54
HOXB3-208ENST00000476342 MMP8P22894 467 aa30.92■■■□□ 2.54
HOXB3-208ENST00000476342 YWHAZP63104 245 aaKnown RBP30.92■■■□□ 2.54
HOXB3-208ENST00000476342 SLC6A3Q01959 620 aa30.92■■■□□ 2.54
HOXB3-208ENST00000476342 VPS36Q86VN1 386 aa30.92■■■□□ 2.54
HOXB3-208ENST00000476342 MIB1Q86YT6 1006 aa30.92■■■□□ 2.54
HOXB3-208ENST00000476342 CNGA4Q8IV77 575 aa30.92■■■□□ 2.54
HOXB3-208ENST00000476342 SLC30A5Q8TAD4 765 aa30.92■■■□□ 2.54
HOXB3-208ENST00000476342 KHSRPQ92945 711 aaKnown RBP eCLIP30.92■■■□□ 2.54
HOXB3-208ENST00000476342 KLF16Q9BXK1 252 aaPredicted RBP30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms