RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 RAD54BQ9Y620 910 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 CCDC195A0A1B0GUA6 201 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 AQP7P3A6NL99 342 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 J3KTA2 159 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 KCNQ3O43525 872 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 PIAS2O75928 621 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 TSPAN9O75954 239 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 RASAL1O95294 804 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 HSPA4LO95757 839 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 VIPP01282 170 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 ANXA6P08133 673 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 CNPP09543 421 aaKnown RBP4.62□□□□□ -1.67
VPS13D-207ENST00000476169 CSF1P09603 554 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 MST1P26927 711 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 SERPINA4P29622 427 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 MLH1P40692 756 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 GCLCP48506 637 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-207ENST00000476169 TOB1P50616 345 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-207ENST00000476169 MC1RQ01726 317 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 NHLH2Q02577 135 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 HHEXQ03014 270 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 GPS1Q13098 491 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 PDCLQ13371 301 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 MAMLD1Q13495 774 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 BOP1Q14137 746 aaKnown RBP4.62□□□□□ -1.67
VPS13D-207ENST00000476169 BECN1Q14457 450 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 RASA2Q15283 850 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 NPY5RQ15761 445 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 TBCEQ15813 527 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-207ENST00000476169 NFIL3Q16649 462 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 CTXN3Q4LDR2 81 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 SNX30Q5VWJ9 437 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 FCRL6Q6DN72 434 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 TAF2Q6P1X5 1199 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 FAM47EQ6ZV65 393 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 KDELC2Q7Z4H8 507 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 GALNT13Q8IUC8 556 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 RHOT2Q8IXI1 618 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 DIS3L2Q8IYB7 885 aaKnown RBP4.62□□□□□ -1.67
VPS13D-207ENST00000476169 GSPT2Q8IYD1 628 aaKnown RBP4.62□□□□□ -1.67
VPS13D-207ENST00000476169 FUKQ8N0W3 1084 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 TAGAPQ8N103 731 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 ANKRD35Q8N283 1001 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 WDR60Q8WVS4 1066 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 MIEF2Q96C03 454 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 FTOQ9C0B1 505 aaKnown RBP eCLIP4.62□□□□□ -1.67
VPS13D-207ENST00000476169 TWSG1Q9GZX9 223 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 SLC25A32Q9H2D1 315 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 RETREG1Q9H6L5 497 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 ZWILCHQ9H900 591 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 GRPEL1Q9HAV7 217 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 ZBTB26Q9HCK0 441 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 DIAPH3Q9NSV4 1193 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 CWC25Q9NXE8 425 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-207ENST00000476169 TMOD4Q9NZQ9 345 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 NDUFAF4Q9P032 175 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 CEP72Q9P209 647 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 ZNF215Q9UL58 517 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-207ENST00000476169 CAPN11Q9UMQ6 739 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 DNAJC16Q9Y2G8 782 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 SNX8Q9Y5X2 465 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 SNX5Q9Y5X3 404 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 SLC30A1Q9Y6M5 507 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 ZNF536O15090 1300 aa4.62□□□□□ -1.67
VPS13D-207ENST00000476169 PNMA6EA0A0J9YXQ4 647 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 VWA3AA6NCI4 1184 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 NPEPPSL1A6NEC2 478 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 EFCAB8A8MWE9 144 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 CAPN14A8MX76 684 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 H3BNC9 293 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 H7C0S8 307 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 CLGNO14967 610 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 KIAA0355O15063 1070 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 RGS10O43665 173 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 RRP9O43818 475 aaKnown RBP4.61□□□□□ -1.67
VPS13D-207ENST00000476169 SGPL1O95470 568 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 SPATA31D3P0C874 917 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 CNR2P34972 360 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 PSMC2P35998 433 aaKnown RBP4.61□□□□□ -1.67
VPS13D-207ENST00000476169 HARS2P49590 506 aaKnown RBP4.61□□□□□ -1.67
VPS13D-207ENST00000476169 CCT4P50991 539 aaKnown RBP4.61□□□□□ -1.67
VPS13D-207ENST00000476169 ZNF134P52741 427 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 LOXL3P58215 753 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 LILRA4P59901 499 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 PRPF4BQ13523 1007 aaKnown RBP4.61□□□□□ -1.67
VPS13D-207ENST00000476169 TDGQ13569 410 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 SEC23BQ15437 767 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 UBXN11Q5T124 520 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 HECTD3Q5T447 861 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 FAM102AQ5T9C2 384 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-207ENST00000476169 TCTN3Q6NUS6 607 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-207ENST00000476169 SPATA31D4Q6ZUB0 917 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 LRRC8DQ7L1W4 858 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 GALNTL5Q7Z4T8 443 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 POLNQ7Z5Q5 900 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 KCTD20Q7Z5Y7 419 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 ANKS1BQ7Z6G8 1248 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 ZNF280BQ86YH2 543 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 RPAP2Q8IXW5 612 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms