RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 TGM5O43548 720 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 NCAM1P13591 858 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 ATF2P15336 505 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 SDC4P31431 198 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 CTNNA1P35221 906 aaKnown RBP18.9■□□□□ 0.62
ATG4B-217ENST00000475693 SNX16P57768 344 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 PIGHQ14442 188 aaPredicted RBP18.9■□□□□ 0.62
ATG4B-217ENST00000475693 EFHC1Q5JVL4 640 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 OTUD1Q5VV17 481 aaPredicted RBP18.9■□□□□ 0.62
ATG4B-217ENST00000475693 PM20D1Q6GTS8 502 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 ZDHHC17Q8IUH5 632 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 C8orf48Q96LL4 319 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 HERPUD2Q9BSE4 406 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.9■□□□□ 0.62
ATG4B-217ENST00000475693 RAB21Q9UL25 225 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 A0A1W2PQH9 124 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 RFXAPO00287 272 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 PER2O15055 1255 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 CAPN15O75808 1086 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 LTFP02788 710 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 MAGEA11P43364 429 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 HDAC4P56524 1084 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 MRPS25P82663 173 aaKnown RBP18.9■□□□□ 0.62
ATG4B-217ENST00000475693 NME3Q13232 169 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 ZFYVE27Q5T4F4 411 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 RNF25Q96BH1 459 aaPredicted RBP18.9■□□□□ 0.62
ATG4B-217ENST00000475693 CNPY3Q9BT09 278 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 GMIPQ9P107 970 aa18.9■□□□□ 0.62
ATG4B-217ENST00000475693 AFF4Q9UHB7 1163 aaKnown RBP18.9■□□□□ 0.62
ATG4B-217ENST00000475693 PRUNE2Q8WUY3 3088 aa18.89■□□□□ 0.62
ATG4B-217ENST00000475693 TCRBV7S2A1N4TA0A589 114 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 ERICH4A6NGS2 130 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 TRIM66O15016 1216 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 HSF2BPO75031 334 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 OAS2P29728 719 aaKnown RBP18.89■□□□□ 0.61
ATG4B-217ENST00000475693 RAB33AQ14088 237 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 DENND5BQ6ZUT9 1274 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 RAPGEF5Q92565 580 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 DDX23Q9BUQ8 820 aaKnown RBP18.89■□□□□ 0.61
ATG4B-217ENST00000475693 POPDC2Q9HBU9 364 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 NR2E1Q9Y466 385 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 EPOPA6NHQ4 379 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 CAPN9O14815 690 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 TBX18O95935 607 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 CD48P09326 243 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 MATKP42679 507 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 SLC1A1P43005 524 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 SULT1E1P49888 294 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 SLC25A11Q02978 314 aaKnown RBP18.89■□□□□ 0.61
ATG4B-217ENST00000475693 SLC20A2Q08357 652 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 TAF10Q12962 218 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 CYP4V2Q6ZWL3 525 aaPredicted RBP18.89■□□□□ 0.61
ATG4B-217ENST00000475693 RBM23Q86U06 439 aaKnown RBP18.89■□□□□ 0.61
ATG4B-217ENST00000475693 NIPA2Q8N8Q9 360 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 FNIP1Q8TF40 1166 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 ARNTL2Q8WYA1 636 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 EXOC4Q96A65 974 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 KLHL5Q96PQ7 755 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 TSPYL1Q9H0U9 437 aa18.89■□□□□ 0.61
ATG4B-217ENST00000475693 C2orf71A6NGG8 1288 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 PRRG1O14668 218 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 FBXO21O94952 628 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 LONRF2Q1L5Z9 754 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 FAM131BQ86XD5 332 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 SLC7A14Q8TBB6 771 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 HSPH1Q92598 858 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 C11orf84Q9BUA3 381 aaPredicted RBP18.88■□□□□ 0.61
ATG4B-217ENST00000475693 HEMGNQ9BXL5 484 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 AP1M1Q9BXS5 423 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 TLR9Q9NR96 1032 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 ASNSD1Q9NWL6 643 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 SFMBT1Q9UHJ3 866 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 USP18Q9UMW8 372 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 SLC38A8A6NNN8 435 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 M0QYT0 321 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 MDM4O15151 490 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 TCP1P17987 556 aaKnown RBP18.88■□□□□ 0.61
ATG4B-217ENST00000475693 KLRC2P26717 231 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 YWHAGP61981 247 aaKnown RBP eCLIP18.88■□□□□ 0.61
ATG4B-217ENST00000475693 TWF1Q12792 350 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 RHOT1Q8IXI2 618 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 UBL4BQ8N7F7 174 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 MRPL43Q8N983 215 aaKnown RBP18.88■□□□□ 0.61
ATG4B-217ENST00000475693 SLC2A13Q96QE2 648 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 HINFPQ9BQA5 517 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 EPC1Q9H2F5 836 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 RXFP1Q9HBX9 757 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 PNPLA8Q9NP80 782 aa18.88■□□□□ 0.61
ATG4B-217ENST00000475693 DAB1O75553 588 aa18.87■□□□□ 0.61
ATG4B-217ENST00000475693 RNF8O76064 485 aa18.87■□□□□ 0.61
ATG4B-217ENST00000475693 PRLRP16471 622 aa18.87■□□□□ 0.61
ATG4B-217ENST00000475693 CTNNA2P26232 953 aa18.87■□□□□ 0.61
ATG4B-217ENST00000475693 MAN1A1P33908 653 aa18.87■□□□□ 0.61
ATG4B-217ENST00000475693 HNRNPH2P55795 449 aaKnown RBP18.87■□□□□ 0.61
ATG4B-217ENST00000475693 ADCY2Q08462 1091 aa18.87■□□□□ 0.61
ATG4B-217ENST00000475693 CA9Q16790 459 aa18.87■□□□□ 0.61
ATG4B-217ENST00000475693 ZC3H12AQ5D1E8 599 aaKnown RBP18.87■□□□□ 0.61
ATG4B-217ENST00000475693 ZDHHC14Q8IZN3 488 aa18.87■□□□□ 0.61
ATG4B-217ENST00000475693 CCDC185Q8N715 623 aa18.87■□□□□ 0.61
ATG4B-217ENST00000475693 TGS1Q96RS0 853 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms