RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 PYCARDQ9ULZ3 195 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 ARHGAP26Q9UNA1 814 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 FHOD1Q9Y613 1164 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 SPTBN4Q9H254 2564 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 SSU72P8A0A1W2PR75 194 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 FAM92AA1XBS5 289 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 GOLGA6L9A6NEM1 432 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 TNFRSF10BO14763 440 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 TBXAS1P24557 533 aaPredicted RBP16.49■□□□□ 0.23
CPSF3-203ENST00000475482 NDST1P52848 882 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 JAM2P57087 298 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 ZXDBP98169 803 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 GCNT1Q02742 428 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 RUNX3Q13761 415 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 CCINQ13939 588 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 MTF1Q14872 753 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 SCARA5Q6ZMJ2 495 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 FAM35AQ86V20 835 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 VPS36Q86VN1 386 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 TXLNBQ8N3L3 684 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 KIAA1958Q8N8K9 716 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 FAXDC2Q96IV6 333 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 CCDC42Q96M95 316 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 DEF6Q9H4E7 631 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 UBE2TQ9NPD8 197 aaPredicted RBP16.49■□□□□ 0.23
CPSF3-203ENST00000475482 KCND1Q9NSA2 647 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 HMGXB4Q9UGU5 601 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 R4GN57 208 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 ATG2BQ96BY7 2078 aa16.49■□□□□ 0.23
CPSF3-203ENST00000475482 ZNF500O60304 480 aaPredicted RBP16.48■□□□□ 0.23
CPSF3-203ENST00000475482 LILRB5O75023 590 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 CLSTN1O94985 981 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 OAS1P00973 400 aaKnown RBP16.48■□□□□ 0.23
CPSF3-203ENST00000475482 CCDC175P0C221 793 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 HDCP19113 662 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 SOX5P35711 763 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 PDE6CP51160 858 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 SLC7A9P82251 487 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 CSTF1Q05048 431 aaKnown RBP16.48■□□□□ 0.23
CPSF3-203ENST00000475482 KLHL30Q0D2K2 578 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 TAF10Q12962 218 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 DRAP1Q14919 205 aaPredicted RBP16.48■□□□□ 0.23
CPSF3-203ENST00000475482 PDGFRLQ15198 375 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 DGKKQ5KSL6 1271 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 TRIM68Q6AZZ1 485 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 WDR59Q6PJI9 974 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 ZC3H14Q6PJT7 736 aaKnown RBP16.48■□□□□ 0.23
CPSF3-203ENST00000475482 ACOT1Q86TX2 421 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 NUP93Q8N1F7 819 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 PPM1KQ8N3J5 372 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 SYNPOQ8N3V7 929 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 ARL14EPQ8N8R7 260 aaPredicted RBP16.48■□□□□ 0.23
CPSF3-203ENST00000475482 ZMIZ2Q8NF64 920 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 OSCP1Q8WVF1 389 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 OVCA2Q8WZ82 227 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 KCNK16Q96T55 309 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 FAM126AQ9BYI3 521 aaPredicted RBP16.48■□□□□ 0.23
CPSF3-203ENST00000475482 EBF3Q9H4W6 596 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 CYP3A43Q9HB55 503 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 CSNK1G1Q9HCP0 422 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 TRPC7Q9HCX4 862 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 LUC7LQ9NQ29 371 aaKnown RBP16.48■□□□□ 0.23
CPSF3-203ENST00000475482 TRPM5Q9NZQ8 1165 aa16.48■□□□□ 0.23
CPSF3-203ENST00000475482 SOWAHDA6NJG2 315 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 F8VZ95 297 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 TRDMT1O14717 391 aaKnown RBP16.47■□□□□ 0.23
CPSF3-203ENST00000475482 PAPSS2O95340 614 aaPredicted RBP16.47■□□□□ 0.23
CPSF3-203ENST00000475482 CKMP06732 381 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 ARSAP15289 507 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 KRT83P78385 493 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 LRRC32Q14392 662 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 TDRD12Q587J7 1177 aaKnown RBP16.47■□□□□ 0.23
CPSF3-203ENST00000475482 TMEM196Q5HYL7 178 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 SNX30Q5VWJ9 437 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 SPEM1Q8N4L4 309 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 SUMF1Q8NBK3 374 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 TTC8Q8TAM2 541 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 WHAMMQ8TF30 809 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 SEMA4DQ92854 862 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 SMARCD1Q96GM5 515 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 TWNKQ96RR1 684 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 RNF38Q9H0F5 515 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 NHEJ1Q9H9Q4 299 aaPredicted RBP16.47■□□□□ 0.23
CPSF3-203ENST00000475482 DMAP1Q9NPF5 467 aaPredicted RBP16.47■□□□□ 0.23
CPSF3-203ENST00000475482 RBM12Q9NTZ6 932 aaKnown RBP16.47■□□□□ 0.23
CPSF3-203ENST00000475482 COMMD8Q9NX08 183 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 ZSCAN32Q9NX65 697 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 PCDHGA2Q9Y5H1 932 aa16.47■□□□□ 0.23
CPSF3-203ENST00000475482 ATP8B3O60423 1300 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 MYOFQ9NZM1 2061 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 AKR1B10O60218 316 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 CILPO75339 1184 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 GFPT2O94808 682 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 RTN3O95197 1032 aaPredicted RBP16.46■□□□□ 0.23
CPSF3-203ENST00000475482 NDUFA10O95299 355 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 LMNAP02545 664 aaKnown RBP16.46■□□□□ 0.23
CPSF3-203ENST00000475482 ZDHHC11BP0C7U3 371 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 PRKCIP41743 596 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 CCR3P51677 355 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 YWHAEP62258 255 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms