RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 ARHGAP17Q68EM7 881 aa12.91□□□□□ -0.34
SSR1-205ENST00000475213 PRR23BQ6ZRT6 265 aa12.91□□□□□ -0.34
SSR1-205ENST00000475213 C12orf40Q86WS4 652 aa12.91□□□□□ -0.34
SSR1-205ENST00000475213 BBS7Q8IWZ6 715 aa12.91□□□□□ -0.34
SSR1-205ENST00000475213 SECISBP2LQ93073 1101 aaKnown RBP12.91□□□□□ -0.34
SSR1-205ENST00000475213 OTUB2Q96DC9 234 aa12.91□□□□□ -0.34
SSR1-205ENST00000475213 NMUR1Q9HB89 426 aa12.91□□□□□ -0.34
SSR1-205ENST00000475213 CYLDQ9NQC7 956 aa12.91□□□□□ -0.34
SSR1-205ENST00000475213 RAB23Q9ULC3 237 aa12.91□□□□□ -0.34
SSR1-205ENST00000475213 CTNND2Q9UQB3 1225 aa12.91□□□□□ -0.34
SSR1-205ENST00000475213 USP3Q9Y6I4 520 aa12.91□□□□□ -0.34
SSR1-205ENST00000475213 DNAH14Q0VDD8 3507 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 BICDL2A1A5D9 508 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 ANTXRLA6NF34 631 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 PMM2O15305 246 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 ADH1CP00326 375 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 ADH5P11766 374 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 RARGP13631 454 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 ATP5C1P36542 298 aaKnown RBP12.9□□□□□ -0.34
SSR1-205ENST00000475213 SEC13P55735 322 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 MESP2Q0VG99 397 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 LRMPQ12912 555 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 LAIR1Q6GTX8 287 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 FOXR2Q6PJQ5 311 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 SYT13Q7L8C5 426 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 CCDC186Q7Z3E2 898 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 SCD5Q86SK9 330 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 SPNS2Q8IVW8 549 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 PNKPQ96T60 521 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 KLF16Q9BXK1 252 aaPredicted RBP12.9□□□□□ -0.34
SSR1-205ENST00000475213 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.9□□□□□ -0.34
SSR1-205ENST00000475213 GMEB2Q9UKD1 530 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 NUDT5Q9UKK9 219 aa12.9□□□□□ -0.34
SSR1-205ENST00000475213 CCDC163A0A0D9SF12 145 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 MDM4O15151 490 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 GREM1O60565 184 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 TBXAS1P24557 533 aaPredicted RBP12.89□□□□□ -0.35
SSR1-205ENST00000475213 EIF2DP41214 584 aaKnown RBP12.89□□□□□ -0.35
SSR1-205ENST00000475213 ID4P47928 161 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 STX17P56962 302 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 UBE2HP62256 183 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 YWHAEP62258 255 aaKnown RBP12.89□□□□□ -0.35
SSR1-205ENST00000475213 GAD2Q05329 585 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 PAK1Q13153 545 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 DMC1Q14565 340 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 RAB41Q5JT25 222 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 KLHDC10Q6PID8 442 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 HTR3DQ70Z44 454 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 PIGZQ86VD9 579 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 TTC30AQ86WT1 665 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 SFTPA1Q8IWL2 248 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 CAMKK1Q8N5S9 505 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 UBR7Q8N806 425 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 ANKRD52Q8NB46 1076 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 CCDC26Q8TAB7 109 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 USP33Q8TEY7 942 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 ACDQ96AP0 544 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 HHIPQ96QV1 700 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 UBXN6Q9BZV1 441 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 SPHK2Q9NRA0 654 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 CHMP5Q9NZZ3 219 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 DNMT3LQ9UJW3 386 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 NAGPAQ9UK23 515 aa12.89□□□□□ -0.35
SSR1-205ENST00000475213 A0A0A0MRY4 1105 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 TULP2O00295 520 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 KAT7O95251 611 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 APODP05090 189 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 TGM1P22735 817 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 GOLGA8FQ08AF8 430 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 GOLGA8DPQ0D2H9 430 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 CAMK4Q16566 473 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 GOLGA7BQ2TAP0 167 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 SGO2Q562F6 1265 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 C2orf27AQ580R0 203 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 C10orf120Q5SQS8 335 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 CEP68Q76N32 757 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 TMEM25Q86YD3 366 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 ETFBKMTQ8IXQ9 262 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 PHTF2Q8N3S3 785 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 ZNF276Q8N554 614 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 GPR161Q8N6U8 529 aaKnown RBP12.88□□□□□ -0.35
SSR1-205ENST00000475213 NAT16Q8N8M0 369 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 LMO3Q8TAP4 145 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 GAB3Q8WWW8 586 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 RMDN1Q96DB5 314 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 NT5C1BQ96P26 610 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 ARHGEF4Q9NR80 690 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 TSPAN16Q9UKR8 245 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 ABCA7Q8IZY2 2146 aa12.88□□□□□ -0.35
SSR1-205ENST00000475213 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.87□□□□□ -0.35
SSR1-205ENST00000475213 XPO1O14980 1071 aaKnown RBP12.87□□□□□ -0.35
SSR1-205ENST00000475213 P4HA2O15460 535 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 HOXC11O43248 304 aaPredicted RBP12.87□□□□□ -0.35
SSR1-205ENST00000475213 RPP40O75818 363 aaKnown RBP12.87□□□□□ -0.35
SSR1-205ENST00000475213 APBB3O95704 486 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 GNA14O95837 355 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 RETP07949 1114 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 RALAP11233 206 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 VDRP11473 427 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 CD19P15391 556 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms