RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PPP1R13BQ96KQ4 1090 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 NOX5Q96PH1 765 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 KLF16Q9BXK1 252 aaPredicted RBP17.77■□□□□ 0.44
SCAF11-206ENST00000474828 SMG9Q9H0W8 520 aaKnown RBP17.77■□□□□ 0.44
SCAF11-206ENST00000474828 NUCKS1Q9H1E3 243 aaKnown RBP17.77■□□□□ 0.44
SCAF11-206ENST00000474828 TRPC7Q9HCX4 862 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 ABCC13Q9NSE7 274 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 ASNSD1Q9NWL6 643 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 NAGPAQ9UK23 515 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 MYO16Q9Y6X6 1858 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 LRRC53A6NM62 1247 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 E5RJQ4 531 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 GYPCP04921 128 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 HNRNPH3P31942 346 aaKnown RBP17.76■□□□□ 0.43
SCAF11-206ENST00000474828 ATP5C1P36542 298 aaKnown RBP17.76■□□□□ 0.43
SCAF11-206ENST00000474828 ZBED6P86452 979 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 PFKPQ01813 784 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 PTPN20Q4JDL3 420 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 TMEM31Q5JXX7 168 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 E4F1Q66K89 784 aaPredicted RBP17.76■□□□□ 0.43
SCAF11-206ENST00000474828 TRIM67Q6ZTA4 783 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 BMP8AQ7Z5Y6 402 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 DDX42Q86XP3 938 aaKnown RBP eCLIP17.76■□□□□ 0.43
SCAF11-206ENST00000474828 ZDHHC17Q8IUH5 632 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 VSTM4Q8IW00 320 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 SCUBE3Q8IX30 993 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 C1orf131Q8NDD1 294 aaKnown RBP17.76■□□□□ 0.43
SCAF11-206ENST00000474828 ST13P5Q8NFI4 369 aaPredicted RBP17.76■□□□□ 0.43
SCAF11-206ENST00000474828 SH3RF2Q8TEC5 729 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 NDRG1Q92597 394 aaKnown RBP17.76■□□□□ 0.43
SCAF11-206ENST00000474828 IRF7Q92985 503 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 PCDHB18PQ96TA0 734 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 LRFN3Q9BTN0 628 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 DNMT3LQ9UJW3 386 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 CEP83Q9Y592 693 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 CPQQ9Y646 472 aa17.76■□□□□ 0.43
SCAF11-206ENST00000474828 E2F8A0AVK6 867 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 SHISA7A6NL88 538 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 LEFTY2O00292 366 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 TBX18O95935 607 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 RALAP11233 206 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 LCP1P13796 627 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 MMP8P22894 467 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 GSCP56915 257 aaPredicted RBP17.75■□□□□ 0.43
SCAF11-206ENST00000474828 SNX16P57768 344 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 CENPCQ03188 943 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 EIF4EBP2Q13542 120 aaPredicted RBP17.75■□□□□ 0.43
SCAF11-206ENST00000474828 MTF1Q14872 753 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 HGSNATQ68CP4 663 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 SPECC1LQ69YQ0 1117 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 OLFML1Q6UWY5 402 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 HFE2Q6ZVN8 426 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 PASD1Q8IV76 773 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 ZNF397Q8NF99 534 aaPredicted RBP17.75■□□□□ 0.43
SCAF11-206ENST00000474828 CLEC4CQ8WTT0 213 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 FAM122AQ96E09 287 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 DDX23Q9BUQ8 820 aaKnown RBP17.75■□□□□ 0.43
SCAF11-206ENST00000474828 C11orf16Q9NQ32 467 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 OLA1Q9NTK5 396 aaKnown RBP17.75■□□□□ 0.43
SCAF11-206ENST00000474828 TJP2Q9UDY2 1190 aa17.75■□□□□ 0.43
SCAF11-206ENST00000474828 DPYSL4O14531 572 aa17.74■□□□□ 0.43
SCAF11-206ENST00000474828 ABL1P00519 1130 aa17.74■□□□□ 0.43
SCAF11-206ENST00000474828 LTFP02788 710 aa17.74■□□□□ 0.43
SCAF11-206ENST00000474828 GLULP15104 373 aa17.74■□□□□ 0.43
SCAF11-206ENST00000474828 PLA2G5P39877 138 aa17.74■□□□□ 0.43
SCAF11-206ENST00000474828 PTP4A2Q12974 167 aa17.74■□□□□ 0.43
SCAF11-206ENST00000474828 HTR3DQ70Z44 454 aa17.74■□□□□ 0.43
SCAF11-206ENST00000474828 SLC26A9Q7LBE3 791 aa17.74■□□□□ 0.43
SCAF11-206ENST00000474828 ARCQ7LC44 396 aa17.74■□□□□ 0.43
SCAF11-206ENST00000474828 OSCP1Q8WVF1 389 aa17.74■□□□□ 0.43
SCAF11-206ENST00000474828 AGPAT1Q99943 283 aa17.74■□□□□ 0.43
SCAF11-206ENST00000474828 TRIM62Q9BVG3 475 aa17.74■□□□□ 0.43
SCAF11-206ENST00000474828 ST7Q9NRC1 585 aa17.74■□□□□ 0.43
SCAF11-206ENST00000474828 THG1LQ9NWX6 298 aaKnown RBP17.74■□□□□ 0.43
SCAF11-206ENST00000474828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.74■□□□□ 0.431e-8■□□□□ 9.5
SCAF11-206ENST00000474828 TECTAO75443 2155 aa17.74■□□□□ 0.43
SCAF11-206ENST00000474828 ZNF263O14978 683 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 GPR37L1O60883 481 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 IGLV3-25P01717 112 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 ERBB2P04626 1255 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 MBL2P11226 248 aaPredicted RBP17.73■□□□□ 0.43
SCAF11-206ENST00000474828 GDI1P31150 447 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 STARD6P59095 220 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 TBX2Q13207 712 aaPredicted RBP17.73■□□□□ 0.43
SCAF11-206ENST00000474828 TRIM14Q14142 442 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 GRM2Q14416 872 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 PDGFRLQ15198 375 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 CLEC16AQ2KHT3 1053 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 SFMBT2Q5VUG0 894 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 TAF3Q5VWG9 929 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 BTBD8Q5XKL5 378 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 PHF13Q86YI8 300 aaPredicted RBP17.73■□□□□ 0.43
SCAF11-206ENST00000474828 GPIHBP1Q8IV16 184 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 DRC7Q8IY82 874 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 OTUB2Q96DC9 234 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 MSANTD3Q96H12 275 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 PIWIL1Q96J94 861 aaKnown RBP17.73■□□□□ 0.43
SCAF11-206ENST00000474828 SLC2A13Q96QE2 648 aa17.73■□□□□ 0.43
SCAF11-206ENST00000474828 KRBA1A5PL33 1030 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 IGLV3-27P01718 113 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms