RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 RXFP3Q9NSD7 469 aa3.88□□□□□ -1.79
ECHDC1-213ENST00000474240 VPS51Q9UID3 782 aa3.88□□□□□ -1.79
ECHDC1-213ENST00000474240 SALL3Q9BXA9 1300 aa3.88□□□□□ -1.79
ECHDC1-213ENST00000474240 POLR2AP24928 1970 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 OR2W5A6NFC9 320 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 UBE2Q2LH0YL09 131 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 PODXLO00592 558 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 MGST3O14880 152 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 ADAMTS3O15072 1205 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 USP1O94782 785 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 VIPP01282 170 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 HNRNPCP07910 306 aaKnown RBP eCLIP3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 CHRM5P08912 532 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 HGFP14210 728 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 JUPP14923 745 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 CREB1P16220 341 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 ENGP17813 658 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 ADRA1DP25100 572 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 MST1P26927 711 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 ATICP31939 592 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 EIF4A1P60842 406 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 TXNL4AP83876 142 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 HOXA4Q00056 320 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 E2F1Q01094 437 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 CYP1B1Q16678 543 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 CERKLQ49MI3 558 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 SYCP2LQ5T4T6 812 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 KLHDC7AQ5VTJ3 777 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 KIAA1614Q5VZ46 1190 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 FCRLBQ6BAA4 426 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 TRIM72Q6ZMU5 477 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 MORC1Q86VD1 984 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 MYLK4Q86YV6 388 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 FSTL5Q8N475 847 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 PNPLA1Q8N8W4 532 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 PARD3BQ8TEW8 1205 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 OVCA2Q8WZ82 227 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 PMM1Q92871 262 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 THAP7Q9BT49 309 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 CINPQ9BW66 212 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 STK33Q9BYT3 514 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 GAR1Q9NY12 217 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 RGL1Q9NZL6 768 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 RIMKLBQ9ULI2 386 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 NFU1Q9UMS0 254 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 MAN2B2Q9Y2E5 1009 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 TBC1D30Q9Y2I9 924 aa3.87□□□□□ -1.79
ECHDC1-213ENST00000474240 GOLGA6L3A6NEY3 463 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 DNAJC9-AS1A6NH13 148 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 TARM1B6A8C7 271 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 CES2O00748 559 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 PLA2G6O60733 806 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 IGLV2-14P01704 120 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 TMEM225BP0DP42 221 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 HARSP12081 509 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 MMP8P22894 467 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 GABRB3P28472 473 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 HSPA7P48741 367 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 POLE2P56282 527 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 SP2Q02086 613 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 SLC10A2Q12908 348 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 FOXF2Q12947 444 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 ATP1A4Q13733 1029 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 KCNAB1Q14722 419 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 STARD3Q14849 445 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 LY6KQ17RY6 165 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 MPEG1Q2M385 716 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 PGBD2Q6P3X8 592 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 CRTC1Q6UUV9 634 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 USP49Q70CQ1 688 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 ARHGEF25Q86VW2 580 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 CCDC28AQ8IWP9 274 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 SYTL1Q8IYJ3 562 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 FAM98AQ8NCA5 519 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 HASPINQ8TF76 798 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 GRAMD1AQ96CP6 724 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 PRR25Q96S07 402 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 WDR24Q96S15 920 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 SEMA4CQ9C0C4 833 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 PCDHAC1Q9H158 963 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 ASB6Q9NWX5 421 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 ST3GAL5Q9UNP4 418 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 SLC27A6Q9Y2P4 619 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 COMMD10Q9Y6G5 202 aa3.86□□□□□ -1.79
ECHDC1-213ENST00000474240 A0A087WZ62 844 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 FAM234BA2RU67 622 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 LINC01548A6NM66 108 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 POC1B-GALNT4F8VUJ3 575 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 NCK2O43639 380 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 WDR47O94967 919 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 FGAP02671 866 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 MATN1P21941 496 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 PPM1AP35813 382 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 TNFAIP2Q03169 654 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 KRT72Q14CN4 511 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 ACOX1Q15067 660 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 TRIM71Q2Q1W2 868 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms