RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 ADH1CP00326 375 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 CALCAP01258 141 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 PAEPP09466 180 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 ADH5P11766 374 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 SLC6A11P48066 632 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 PSEN1P49768 467 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 SLC8A3P57103 927 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 GCNT1Q02742 428 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 MESP2Q0VG99 397 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 C10orf120Q5SQS8 335 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 LY6G5CQ5SRR4 150 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 HEATR6Q6AI08 1181 aaKnown RBP18.86■□□□□ 0.61
UPF3A-203ENST00000474056 KLHDC10Q6PID8 442 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 CREBRFQ8IUR6 639 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 MLKLQ8NB16 471 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 UBA3Q8TBC4 463 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 KREMEN1Q96MU8 473 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 INTS2Q9H0H0 1204 aaKnown RBP18.86■□□□□ 0.61
UPF3A-203ENST00000474056 NUP62CLQ9H1M0 184 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 SMG5Q9UPR3 1016 aaKnown RBP18.86■□□□□ 0.61
UPF3A-203ENST00000474056 ATG13O75143 517 aa18.85■□□□□ 0.61
UPF3A-203ENST00000474056 RALAP11233 206 aa18.85■□□□□ 0.61
UPF3A-203ENST00000474056 BRD2P25440 801 aaKnown RBP18.85■□□□□ 0.61
UPF3A-203ENST00000474056 TKTL1P51854 596 aa18.85■□□□□ 0.61
UPF3A-203ENST00000474056 PKDCCQ504Y2 493 aa18.85■□□□□ 0.61
UPF3A-203ENST00000474056 HTR3DQ70Z44 454 aa18.85■□□□□ 0.61
UPF3A-203ENST00000474056 IRF2BP1Q8IU81 584 aa18.85■□□□□ 0.61
UPF3A-203ENST00000474056 ZNF276Q8N554 614 aa18.85■□□□□ 0.61
UPF3A-203ENST00000474056 RBBP8NLQ8NC74 664 aaPredicted RBP18.85■□□□□ 0.61
UPF3A-203ENST00000474056 NDRG1Q92597 394 aaKnown RBP18.85■□□□□ 0.61
UPF3A-203ENST00000474056 ZSWIM1Q9BR11 485 aa18.85■□□□□ 0.61
UPF3A-203ENST00000474056 ULBP1Q9BZM6 244 aa18.85■□□□□ 0.61
UPF3A-203ENST00000474056 SPHK2Q9NRA0 654 aa18.85■□□□□ 0.61
UPF3A-203ENST00000474056 CLIC5Q9NZA1 410 aa18.85■□□□□ 0.61
UPF3A-203ENST00000474056 DNMT3LQ9UJW3 386 aa18.85■□□□□ 0.61
UPF3A-203ENST00000474056 K7EQS6 105 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 PLA2G4AP47712 749 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 ZNF132P52740 706 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 SEC13P55735 322 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 GAD2Q05329 585 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 GOLGA8FQ08AF8 430 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 GOLGA8DPQ0D2H9 430 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 ADIGQ0VDE8 80 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 SRSF5Q13243 272 aaKnown RBP18.84■□□□□ 0.61
UPF3A-203ENST00000474056 DPCR1Q3MIW9 517 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 LCLAT1Q6UWP7 414 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 BHLHA9Q7RTU4 235 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 TADA2BQ86TJ2 420 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 LONP2Q86WA8 852 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 MIB1Q86YT6 1006 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 SFTPA1Q8IWL2 248 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 DCLK2Q8N568 766 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 HINFPQ9BQA5 517 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 RASAL2Q9UJF2 1139 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 LSM7Q9UK45 103 aaKnown RBP18.84■□□□□ 0.61
UPF3A-203ENST00000474056 KIAA1257Q9ULG3 409 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 SLC8A2Q9UPR5 921 aa18.84■□□□□ 0.61
UPF3A-203ENST00000474056 ZBED1O96006 694 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 SETSIPP0DME0 302 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 HOXA6P31267 233 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 EIF2DP41214 584 aaKnown RBP18.83■□□□□ 0.6
UPF3A-203ENST00000474056 PXNP49023 591 aaPredicted RBP18.83■□□□□ 0.6
UPF3A-203ENST00000474056 YWHAGP61981 247 aaKnown RBP eCLIP18.83■□□□□ 0.6
UPF3A-203ENST00000474056 KDSRQ06136 332 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 EFEMP1Q12805 493 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 PM20D1Q6GTS8 502 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 WDR5BQ86VZ2 330 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 TMEM25Q86YD3 366 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 ETFBKMTQ8IXQ9 262 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 NAT16Q8N8M0 369 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 RUBCNQ92622 972 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 HHIPQ96QV1 700 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 PNKPQ96T60 521 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 CRACR2AQ9BSW2 395 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 LRRC4Q9HBW1 653 aa18.83■□□□□ 0.6
UPF3A-203ENST00000474056 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.83■□□□□ 0.6
UPF3A-203ENST00000474056 M0QYV0 167 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 HOXC11O43248 304 aaPredicted RBP18.82■□□□□ 0.6
UPF3A-203ENST00000474056 HRO43593 1189 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 STC2O76061 302 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 APODP05090 189 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 DMC1Q14565 340 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 CNGA2Q16280 664 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 LPAL2Q16609 132 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 TPD52L1Q16890 204 aaPredicted RBP18.82■□□□□ 0.6
UPF3A-203ENST00000474056 ANO4Q32M45 955 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 Q6ZNB5 142 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 ARHGAP18Q8N392 663 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 PHTF2Q8N3S3 785 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 USP33Q8TEY7 942 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 KCTD13Q8WZ19 329 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 SECISBP2LQ93073 1101 aaKnown RBP18.82■□□□□ 0.6
UPF3A-203ENST00000474056 ACDQ96AP0 544 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 CDK5RAP1Q96SZ6 601 aaKnown RBP18.82■□□□□ 0.6
UPF3A-203ENST00000474056 UBE2TQ9NPD8 197 aaPredicted RBP18.82■□□□□ 0.6
UPF3A-203ENST00000474056 ARHGEF4Q9NR80 690 aa18.82■□□□□ 0.6
UPF3A-203ENST00000474056 KAT7O95251 611 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 HMBSP08397 361 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 LCP1P13796 627 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 SLC9A1P19634 815 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms