RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 CFHR1Q03591 330 aa17.21■□□□□ 0.35
HPS4-210ENST00000473782 DHX8Q14562 1220 aaKnown RBP17.21■□□□□ 0.35
HPS4-210ENST00000473782 SNX30Q5VWJ9 437 aa17.21■□□□□ 0.35
HPS4-210ENST00000473782 TDRD10Q5VZ19 366 aaKnown RBP17.21■□□□□ 0.35
HPS4-210ENST00000473782 ZNF720Q7Z2F6 126 aa17.21■□□□□ 0.35
HPS4-210ENST00000473782 TMPRSS12Q86WS5 348 aa17.21■□□□□ 0.35
HPS4-210ENST00000473782 SAAL1Q96ER3 474 aa17.21■□□□□ 0.35
HPS4-210ENST00000473782 MTMR12Q9C0I1 747 aa17.21■□□□□ 0.35
HPS4-210ENST00000473782 CCSER2Q9H7U1 834 aa17.21■□□□□ 0.35
HPS4-210ENST00000473782 SNX11Q9Y5W9 270 aa17.21■□□□□ 0.35
HPS4-210ENST00000473782 PTPRJQ12913 1337 aa17.21■□□□□ 0.34
HPS4-210ENST00000473782 KCNK3O14649 394 aa17.2■□□□□ 0.34
HPS4-210ENST00000473782 ZBTB24O43167 697 aaPredicted RBP17.2■□□□□ 0.34
HPS4-210ENST00000473782 IGLV3-19P01714 112 aa17.2■□□□□ 0.34
HPS4-210ENST00000473782 WARSP23381 471 aaKnown RBP17.2■□□□□ 0.34
HPS4-210ENST00000473782 TPMTP51580 245 aa17.2■□□□□ 0.34
HPS4-210ENST00000473782 MCM6Q14566 821 aa17.2■□□□□ 0.34
HPS4-210ENST00000473782 KCNT1Q5JUK3 1230 aa17.2■□□□□ 0.34
HPS4-210ENST00000473782 SDE2Q6IQ49 451 aa17.2■□□□□ 0.34
HPS4-210ENST00000473782 LURAP1LQ8IV03 231 aa17.2■□□□□ 0.34
HPS4-210ENST00000473782 CCDC83Q8IWF9 413 aa17.2■□□□□ 0.34
HPS4-210ENST00000473782 KIF2CQ99661 725 aa17.2■□□□□ 0.34
HPS4-210ENST00000473782 EHD2Q9NZN4 543 aa17.2■□□□□ 0.34
HPS4-210ENST00000473782 CHORDC1Q9UHD1 332 aaPredicted RBP17.2■□□□□ 0.34
HPS4-210ENST00000473782 COL6A6A6NMZ7 2263 aa17.2■□□□□ 0.34
HPS4-210ENST00000473782 VWA3AA6NCI4 1184 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 KRT19P08727 400 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 ZDHHC11BP0C7U3 371 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 TYRP14679 529 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 ENPP2Q13822 863 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 GNL2Q13823 731 aaKnown RBP17.19■□□□□ 0.34
HPS4-210ENST00000473782 MAPRE1Q15691 268 aaKnown RBP17.19■□□□□ 0.34
HPS4-210ENST00000473782 MDH1BQ5I0G3 518 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 NUDT18Q6ZVK8 323 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 SCAMP5Q8TAC9 235 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 CACTINQ8WUQ7 758 aaKnown RBP17.19■□□□□ 0.34
HPS4-210ENST00000473782 SLITRK1Q96PX8 696 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 MRPL45Q9BRJ2 306 aaKnown RBP17.19■□□□□ 0.34
HPS4-210ENST00000473782 ZNF518BQ9C0D4 1074 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 ZHX3Q9H4I2 956 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 PDE11AQ9HCR9 933 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 IL37Q9NZH6 218 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 MARK1Q9P0L2 795 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 DNMT3LQ9UJW3 386 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 FBXO10Q9UK96 956 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 SH3BP1Q9Y3L3 701 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 STON1Q9Y6Q2 735 aa17.19■□□□□ 0.34
HPS4-210ENST00000473782 TEX51A0A1B0GUA7 166 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 NEDD8-MDP1E9PL57 170 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 PYCARD-AS1I3L0S3 204 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 CLDN5O00501 218 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 PCDHGA12O60330 932 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 YWHAQP27348 245 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 NEK4P51957 841 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 COPAP53621 1224 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 SEMG2Q02383 582 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 IFRD2Q12894 506 aaPredicted RBP17.18■□□□□ 0.34
HPS4-210ENST00000473782 SUZ12Q15022 739 aaKnown RBP17.18■□□□□ 0.34
HPS4-210ENST00000473782 POSTNQ15063 836 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 CCDC157Q569K6 752 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 HECTD3Q5T447 861 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 HTR3DQ70Z44 454 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 GPR155Q7Z3F1 870 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 OR5B17Q8NGF7 314 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 SNIP1Q8TAD8 396 aaKnown RBP17.18■□□□□ 0.34
HPS4-210ENST00000473782 OVCA2Q8WZ82 227 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 NXPE2Q96DL1 559 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 LLPHQ9BRT6 129 aaKnown RBP17.18■□□□□ 0.34
HPS4-210ENST00000473782 DPEP3Q9H4B8 488 aa17.18■□□□□ 0.34
HPS4-210ENST00000473782 RBAKQ9NYW8 714 aaPredicted RBP17.18■□□□□ 0.34
HPS4-210ENST00000473782 IRF1P10914 325 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 ABCD1P33897 745 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 IL12RB1P42701 662 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 GRK6P43250 576 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 RTP5Q14D33 572 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 LAYNQ6UX15 382 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 TPGS1Q6ZTW0 290 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 NUP93Q8N1F7 819 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 SCFD1Q8WVM8 642 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 FBXO32Q969P5 355 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 HPDLQ96IR7 371 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 CDK5RAP3Q96JB5 506 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 KCNK16Q96T55 309 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 COL12A1Q99715 3063 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 B3GNT5Q9BYG0 378 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 SEMA4CQ9C0C4 833 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 ANKRD6Q9Y2G4 727 aa17.17■□□□□ 0.34
HPS4-210ENST00000473782 TMEM131Q92545 1883 aa17.16■□□□□ 0.34
HPS4-210ENST00000473782 FAM92AA1XBS5 289 aa17.16■□□□□ 0.34
HPS4-210ENST00000473782 GOLGA8IPA6NC78 632 aa17.16■□□□□ 0.34
HPS4-210ENST00000473782 GOLGA8JA6NMD2 632 aa17.16■□□□□ 0.34
HPS4-210ENST00000473782 H0Y8X5 98 aa17.16■□□□□ 0.34
HPS4-210ENST00000473782 CBX4O00257 560 aa17.16■□□□□ 0.34
HPS4-210ENST00000473782 CAPN9O14815 690 aa17.16■□□□□ 0.34
HPS4-210ENST00000473782 PTPN1P18031 435 aaKnown RBP17.16■□□□□ 0.34
HPS4-210ENST00000473782 ACO1P21399 889 aaKnown RBP17.16■□□□□ 0.34
HPS4-210ENST00000473782 TUBP50607 506 aa17.16■□□□□ 0.34
HPS4-210ENST00000473782 TLE3Q04726 772 aa17.16■□□□□ 0.34
HPS4-210ENST00000473782 NUMA1Q14980 2115 aa17.16■□□□□ 0.34
HPS4-210ENST00000473782 LRRC69Q6ZNQ3 347 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms