RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 LIMD1Q9UGP4 676 aa19.91■□□□□ 0.78
CTDSP1-207ENST00000473420 ARHGAP26Q9UNA1 814 aa19.91■□□□□ 0.78
CTDSP1-207ENST00000473420 GOLGA6L3A6NEY3 463 aa19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 COCHO43405 550 aa19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 PRAMEF12O95522 483 aa19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 GLI1P08151 1106 aa19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 MMP8P22894 467 aa19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 ATP5C1P36542 298 aaKnown RBP19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 EFHC1Q5JVL4 640 aa19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 BSPRYQ5W0U4 402 aa19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 TOGARAM2Q6ZUX3 1019 aa19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 PHF13Q86YI8 300 aaPredicted RBP19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 CELF5Q8N6W0 485 aaKnown RBP19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 NDRG1Q92597 394 aaKnown RBP19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 USP13Q92995 863 aaPredicted RBP19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 CYP2S1Q96SQ9 504 aa19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 RNF38Q9H0F5 515 aa19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 KCNK12Q9HB15 430 aa19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 NUMBLQ9Y6R0 609 aa19.9■□□□□ 0.78
CTDSP1-207ENST00000473420 DPYSL4O14531 572 aa19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 GZMAP12544 262 aa19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 ADKP55263 362 aaKnown RBP19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 GSCP56915 257 aaPredicted RBP19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 TANGO2Q6ICL3 276 aa19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 OR6B2Q6IFH4 312 aa19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 WDR59Q6PJI9 974 aa19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 OLFML1Q6UWY5 402 aa19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 FAM183BPQ6ZVS7 135 aa19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 DDX42Q86XP3 938 aaKnown RBP eCLIP19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 XYLT1Q86Y38 959 aa19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 SLC30A5Q8TAD4 765 aa19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 DEPDC1BQ8WUY9 529 aa19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 GRPEL1Q9HAV7 217 aa19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 MYO10Q9HD67 2058 aa19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 ARHGAP20Q9P2F6 1191 aa19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 STRIP2Q9ULQ0 834 aa19.89■□□□□ 0.77
CTDSP1-207ENST00000473420 DDX3XO00571 662 aaKnown RBP eCLIP19.88■□□□□ 0.773e-13■■■□□ 17.9
CTDSP1-207ENST00000473420 CALB1P05937 261 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 MBL2P11226 248 aaPredicted RBP19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 CDK17Q00537 523 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 SLC6A3Q01959 620 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 C1QBPQ07021 282 aaKnown RBP19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 USP4Q13107 963 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 C10orf120Q5SQS8 335 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 ACAD10Q6JQN1 1059 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 HFE2Q6ZVN8 426 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 SLC26A9Q7LBE3 791 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 RNF135Q8IUD6 432 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 MFSD6LQ8IWD5 586 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 KIAA1958Q8N8K9 716 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 TC2NQ8N9U0 490 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 RNF139Q8WU17 664 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 FAM149B1Q96BN6 582 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 VCPIP1Q96JH7 1222 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 NECAB3Q96P71 396 aaPredicted RBP19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 KXD1Q9BQD3 176 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 NACA2Q9H009 215 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 POPDC2Q9HBU9 364 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 WDR35Q9P2L0 1181 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 IMPACTQ9P2X3 320 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 DNMT3LQ9UJW3 386 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 CPQQ9Y646 472 aa19.88■□□□□ 0.77
CTDSP1-207ENST00000473420 SSU72P8A0A1W2PR75 194 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 HEPACAM2A8MVW5 462 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 HSF2BPO75031 334 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 VIPR2P41587 438 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 YWHAZP63104 245 aaKnown RBP19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 PTP4A2Q12974 167 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 MAPK8IP2Q13387 824 aaPredicted RBP19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 MSANTD2Q6P1R3 559 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 VITQ6UXI7 678 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 MMS22LQ6ZRQ5 1243 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 MON1BQ7L1V2 547 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 RSRC2Q7L4I2 434 aaKnown RBP19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 BPIFB1Q8TDL5 484 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 RSAD2Q8WXG1 361 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 RSPRY1Q96DX4 576 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 PIWIL1Q96J94 861 aaKnown RBP19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 ZFRQ96KR1 1074 aaKnown RBP19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 C11orf70Q9BRQ4 267 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 SMG9Q9H0W8 520 aaKnown RBP19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 CD320Q9NPF0 282 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 ADAM22Q9P0K1 906 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 SORCS3Q9UPU3 1222 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 CCL26Q9Y258 94 aa19.87■□□□□ 0.77
CTDSP1-207ENST00000473420 RTN2O75298 545 aa19.86■□□□□ 0.77
CTDSP1-207ENST00000473420 TBX18O95935 607 aa19.86■□□□□ 0.77
CTDSP1-207ENST00000473420 FYNP06241 537 aa19.86■□□□□ 0.77
CTDSP1-207ENST00000473420 ASGR2P07307 311 aa19.86■□□□□ 0.77
CTDSP1-207ENST00000473420 PLEKP08567 350 aaPredicted RBP19.86■□□□□ 0.77
CTDSP1-207ENST00000473420 PSMC3P17980 439 aa19.86■□□□□ 0.77
CTDSP1-207ENST00000473420 GOLGA8FQ08AF8 430 aa19.86■□□□□ 0.77
CTDSP1-207ENST00000473420 GOLGA8DPQ0D2H9 430 aa19.86■□□□□ 0.77
CTDSP1-207ENST00000473420 FCHO2Q0JRZ9 810 aa19.86■□□□□ 0.77
CTDSP1-207ENST00000473420 TDGQ13569 410 aa19.86■□□□□ 0.77
CTDSP1-207ENST00000473420 ZNF77Q15935 545 aa19.86■□□□□ 0.77
CTDSP1-207ENST00000473420 ARCQ7LC44 396 aa19.86■□□□□ 0.77
CTDSP1-207ENST00000473420 SLC44A3Q8N4M1 653 aa19.86■□□□□ 0.77
CTDSP1-207ENST00000473420 EDEM1Q92611 657 aa19.86■□□□□ 0.77
CTDSP1-207ENST00000473420 SLC2A13Q96QE2 648 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms