RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 RBBP8NLQ8NC74 664 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-222ENST00000473373 RNF139Q8WU17 664 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 CRACR2AQ9BSW2 395 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 FAM126AQ9BYI3 521 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-222ENST00000473373 UBE2TQ9NPD8 197 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-222ENST00000473373 KIAA1257Q9ULG3 409 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 PCDHGA2Q9Y5H1 932 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 CACNA1AO00555 2505 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 DMXL1Q9Y485 3027 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 EML5Q05BV3 1969 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 SHISA7A6NL88 538 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.11□□□□□ -0.47
CPNE1-222ENST00000473373 HHLA1C9JL84 531 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 XPO1O14980 1071 aaKnown RBP12.11□□□□□ -0.47
CPNE1-222ENST00000473373 MDM4O15151 490 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 OLFM2O95897 454 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 TBX18O95935 607 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 CYP17A1P05093 508 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 PAEPP09466 180 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 SETSIPP0DME0 302 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 PLA2G4AP47712 749 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 RGS7P49802 495 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 MFAP3P55082 362 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 MARSP56192 900 aaKnown RBP12.11□□□□□ -0.47
CPNE1-222ENST00000473373 YWHAGP61981 247 aaKnown RBP eCLIP12.11□□□□□ -0.47
CPNE1-222ENST00000473373 GAD2Q05329 585 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 ADIGQ0VDE8 80 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 FZD5Q13467 585 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 CCINQ13939 588 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 STILQ15468 1287 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 ARHGAP44Q17R89 818 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 RSPO4Q2I0M5 234 aaPredicted RBP12.11□□□□□ -0.47
CPNE1-222ENST00000473373 SNX30Q5VWJ9 437 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 SASS6Q6UVJ0 657 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 TPGS1Q6ZTW0 290 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 ARHGEF19Q8IW93 802 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 BBS7Q8IWZ6 715 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 MAML2Q8IZL2 1156 aaPredicted RBP12.11□□□□□ -0.47
CPNE1-222ENST00000473373 NAT16Q8N8M0 369 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 SUMF1Q8NBK3 374 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 RPLP0P6Q8NHW5 317 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 KAT5Q92993 513 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 ACDQ96AP0 544 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 OTUB2Q96DC9 234 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 FAM81BQ96LP2 452 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 ULBP1Q9BZM6 244 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 PRMT8Q9NR22 394 aaPredicted RBP12.11□□□□□ -0.47
CPNE1-222ENST00000473373 ST7Q9NRC1 585 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 IL37Q9NZH6 218 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 FRYLO94915 3013 aa12.11□□□□□ -0.47
CPNE1-222ENST00000473373 EP300Q09472 2414 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-222ENST00000473373 FAM92AA1XBS5 289 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 CHURC1-FNTBB4DL54 471 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 NEDD8-MDP1E9PL57 170 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 PIK3R2O00459 728 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 PMM2O15305 246 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 THAP12O43422 761 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 MED7O43513 233 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 ZBED1O96006 694 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 ZDHHC11BP0C7U3 371 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 FNTBP49356 437 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 MCCD1P59942 119 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-222ENST00000473373 COG7P83436 770 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 ZXDBP98169 803 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 GCNT1Q02742 428 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 EXOC3L4Q17RC7 722 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 DPCR1Q3MIW9 517 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 C2orf27AQ580R0 203 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 LY6G5CQ5SRR4 150 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 NAIF1Q69YI7 327 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-222ENST00000473373 BHMTQ93088 406 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 XPO6Q96QU8 1125 aaKnown RBP12.1□□□□□ -0.47
CPNE1-222ENST00000473373 PNKPQ96T60 521 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 BBS2Q9BXC9 721 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 THAP9Q9H5L6 903 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 NMUR1Q9HB89 426 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 CYLDQ9NQC7 956 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 ARHGEF4Q9NR80 690 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 OLA1Q9NTK5 396 aaKnown RBP12.1□□□□□ -0.47
CPNE1-222ENST00000473373 LMBRD1Q9NUN5 540 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.1□□□□□ -0.47
CPNE1-222ENST00000473373 DLL3Q9NYJ7 618 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 GMEB2Q9UKD1 530 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 THADAQ6YHU6 1953 aa12.1□□□□□ -0.47
CPNE1-222ENST00000473373 SLC12A8A0AV02 714 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 KRT37O76014 449 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 LETM1O95202 739 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-222ENST00000473373 CYBBP04839 570 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 GNA15P30679 374 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 LPAL2Q16609 132 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 MAN2A1Q16706 1144 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 ENOSF1Q7L5Y1 443 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-222ENST00000473373 ADGRG2Q8IZP9 1017 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 ZNF687Q8N1G0 1237 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 KIAA1958Q8N8K9 716 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 ANKRD20A12PQ8NF67 263 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 CNTNAP3BQ96NU0 1288 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 HHIPQ96QV1 700 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 KLF16Q9BXK1 252 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms