RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 FASNP49327 2511 aaKnown RBP11.87□□□□□ -0.51
ACTB-209ENST00000473257 CELSR3Q9NYQ7 3312 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 A0A0A0MRY4 1105 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 PRRT4C9JH25 899 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 HOXC11O43248 304 aaPredicted RBP11.86□□□□□ -0.51
ACTB-209ENST00000473257 TLR5O60602 858 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 PPP6R2O75170 966 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 C4BPAP04003 597 aaKnown RBP11.86□□□□□ -0.51
ACTB-209ENST00000473257 ZDHHC11BP0C7U3 371 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 HOXB2P14652 356 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 NDUFV2P19404 249 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 CSRP1P21291 193 aaKnown RBP11.86□□□□□ -0.51
ACTB-209ENST00000473257 EIF2DP41214 584 aaKnown RBP11.86□□□□□ -0.51
ACTB-209ENST00000473257 RPL6Q02878 288 aaKnown RBP11.86□□□□□ -0.51
ACTB-209ENST00000473257 STK4Q13043 487 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 PKP1Q13835 747 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 KNOP1Q1ED39 458 aaKnown RBP11.86□□□□□ -0.51
ACTB-209ENST00000473257 ZNF667Q5HYK9 610 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 C1orf220Q5T0J3 134 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 BTBD8Q5XKL5 378 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 CNNM4Q6P4Q7 775 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 C11orf74Q86VG3 221 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 DDX42Q86XP3 938 aaKnown RBP eCLIP11.86□□□□□ -0.512e-24■□□□□ 9.3
ACTB-209ENST00000473257 SLC41A1Q8IVJ1 513 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 TERB1Q8NA31 727 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 KIAA0895Q8NCT3 520 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 PDZD8Q8NEN9 1154 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 CCDC26Q8TAB7 109 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 PARD3BQ8TEW8 1205 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 GATA6Q92908 595 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 KLF16Q9BXK1 252 aaPredicted RBP11.86□□□□□ -0.51
ACTB-209ENST00000473257 NUSAP1Q9BXS6 441 aaKnown RBP11.86□□□□□ -0.51
ACTB-209ENST00000473257 LRRC27Q9C0I9 530 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 CUEDC2Q9H467 287 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 CACNA2D2Q9NY47 1150 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 IL37Q9NZH6 218 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 TBC1D14Q9P2M4 693 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 SERTAD1Q9UHV2 236 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 PILRBQ9UKJ0 227 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 PCDHA7Q9UN72 937 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 MYH10P35580 1976 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 KNL1Q8NG31 2342 aa11.86□□□□□ -0.51
ACTB-209ENST00000473257 IGHV1OR15-9A0A0B4J2B8 117 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.85□□□□□ -0.51
ACTB-209ENST00000473257 K7ELQ4 463 aaPredicted RBP11.85□□□□□ -0.51
ACTB-209ENST00000473257 KLRC4O43908 158 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 STAU1O95793 577 aaKnown RBP11.85□□□□□ -0.51
ACTB-209ENST00000473257 CEACAM1P13688 526 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 TYRP14679 529 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 MAOBP27338 520 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 ATICP31939 592 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 SIM1P81133 766 aaPredicted RBP11.85□□□□□ -0.51
ACTB-209ENST00000473257 AMPD3Q01432 767 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 BMT2Q1RMZ1 405 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 GRAMD4Q6IC98 578 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 SPRYD3Q8NCJ5 442 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 SMARCD1Q96GM5 515 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 INTS4Q96HW7 963 aaKnown RBP11.85□□□□□ -0.51
ACTB-209ENST00000473257 ZNF396Q96N95 335 aaPredicted RBP11.85□□□□□ -0.51
ACTB-209ENST00000473257 BBS2Q9BXC9 721 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 CD248Q9HCU0 757 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 EVLQ9UI08 416 aaPredicted RBP11.85□□□□□ -0.51
ACTB-209ENST00000473257 CEP192Q8TEP8 1941 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 ATP8B3O60423 1300 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 UBE4BO95155 1302 aa11.85□□□□□ -0.51
ACTB-209ENST00000473257 A0A1W2PQH9 124 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 HHLA1C9JL84 531 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 YEATS4O95619 227 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 HMBSP08397 361 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 FAM163BP0C2L3 166 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 CD58P19256 250 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 NTSR1P30989 418 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 ASPAP45381 313 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 ME1P48163 572 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 SNX30Q5VWJ9 437 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 KIAA1324Q6UXG2 1013 aaKnown RBP11.84□□□□□ -0.51
ACTB-209ENST00000473257 PIP4P1Q86T03 277 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 CACUL1Q86Y37 369 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 C12orf56Q8IXR9 622 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 CHPFQ8IZ52 775 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 CHCHD4Q8N4Q1 142 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 TRIML1Q8N9V2 468 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 IPO4Q8TEX9 1081 aaKnown RBP11.84□□□□□ -0.51
ACTB-209ENST00000473257 OVCA2Q8WZ82 227 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 HSPA12BQ96MM6 686 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 MMRN2Q9H8L6 949 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 APOBEC3GQ9HC16 384 aaKnown RBP11.84□□□□□ -0.51
ACTB-209ENST00000473257 DMAC2Q9NW81 257 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 LOC400499M0QZD8 3231 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 PLXND1Q9Y4D7 1925 aa11.84□□□□□ -0.51
ACTB-209ENST00000473257 PCDH15Q96QU1 1955 aa11.83□□□□□ -0.52
ACTB-209ENST00000473257 FAM92AA1XBS5 289 aa11.83□□□□□ -0.52
ACTB-209ENST00000473257 SRRM3A6NNA2 597 aaPredicted RBP11.83□□□□□ -0.52
ACTB-209ENST00000473257 ACTN4O43707 911 aaKnown RBP11.83□□□□□ -0.52
ACTB-209ENST00000473257 KIF20AO95235 890 aa11.83□□□□□ -0.52
ACTB-209ENST00000473257 HLA-DRAP01903 254 aa11.83□□□□□ -0.52
ACTB-209ENST00000473257 NR3C1P04150 777 aa11.83□□□□□ -0.52
ACTB-209ENST00000473257 CISD3P0C7P0 127 aa11.83□□□□□ -0.52
ACTB-209ENST00000473257 TRIM49P0CI25 452 aa11.83□□□□□ -0.52
ACTB-209ENST00000473257 TRIM49CP0CI26 452 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms