RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.58■□□□□ 0.4
USP40-212ENST00000473191 TBC1D14Q9P2M4 693 aa17.58■□□□□ 0.4
USP40-212ENST00000473191 USP3Q9Y6I4 520 aa17.58■□□□□ 0.4
USP40-212ENST00000473191 RALGAPA1Q6GYQ0 2036 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 ADAM23O75077 832 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 TULP3O75386 442 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 KLF8O95600 359 aaPredicted RBP17.57■□□□□ 0.4
USP40-212ENST00000473191 ADH1CP00326 375 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 BCKDHBP21953 392 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 DGKEP52429 567 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 FKBP3Q00688 224 aaKnown RBP17.57■□□□□ 0.4
USP40-212ENST00000473191 LRMPQ12912 555 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 CSRP2Q16527 193 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 ANO4Q32M45 955 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 PLK5Q496M5 336 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 ANO7Q6IWH7 933 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 TPGS1Q6ZTW0 290 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 CACNA2D4Q7Z3S7 1137 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 MIB1Q86YT6 1006 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 CCDC150Q8NCX0 1101 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 TSTD1Q8NFU3 115 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 SLC35C1Q96A29 364 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 EXOC4Q96A65 974 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 ACDQ96AP0 544 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 ERLEC1Q96DZ1 483 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 TIGD1Q96MW7 591 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 DUSP9Q99956 384 aaKnown RBP17.57■□□□□ 0.4
USP40-212ENST00000473191 EBF1Q9UH73 591 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 CDV3Q9UKY7 258 aaKnown RBP17.57■□□□□ 0.4
USP40-212ENST00000473191 MMP17Q9ULZ9 603 aa17.57■□□□□ 0.4
USP40-212ENST00000473191 A0A0A0MRY4 1105 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 SLC16A3O15427 465 aaKnown RBP17.56■□□□□ 0.4
USP40-212ENST00000473191 CALCAP01258 141 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 APODP05090 189 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 ATP5C1P36542 298 aaKnown RBP17.56■□□□□ 0.4
USP40-212ENST00000473191 EIF2DP41214 584 aaKnown RBP17.56■□□□□ 0.4
USP40-212ENST00000473191 GAD2Q05329 585 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 CRY1Q16526 586 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 TCEAL6Q6IPX3 200 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 HTR3DQ70Z44 454 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 PIGZQ86VD9 579 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 RASSF3Q86WH2 238 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 BHMTQ93088 406 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 TCEAL3Q969E4 200 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 ZC3H10Q96K80 434 aaKnown RBP17.56■□□□□ 0.4
USP40-212ENST00000473191 TSG101Q99816 390 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 PNPLA8Q9NP80 782 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 NAGPAQ9UK23 515 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 COQ4Q9Y3A0 265 aa17.56■□□□□ 0.4
USP40-212ENST00000473191 SDK1Q7Z5N4 2213 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 PRR5-ARHGAP8B1AHC4 643 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 HOXC11O43248 304 aaPredicted RBP17.55■□□□□ 0.4
USP40-212ENST00000473191 LRP3O75074 770 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 EPN2O95208 641 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 SMC2O95347 1197 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 KLKB1P03952 638 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 GRIA2P42262 883 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 MRPS21P82921 87 aaKnown RBP17.55■□□□□ 0.4
USP40-212ENST00000473191 ARHGAP8P85298 464 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 FOXK2Q01167 660 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 C10orf120Q5SQS8 335 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 KLHL10Q6JEL2 608 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 TOGARAM2Q6ZUX3 1019 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 BHLHA9Q7RTU4 235 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 CCDC186Q7Z3E2 898 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 UBR7Q8N806 425 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 RLN3Q8WXF3 142 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 KAT5Q92993 513 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 OTUB2Q96DC9 234 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 CCDC34Q96HJ3 373 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 CEP250Q9BV73 2442 aa17.55■□□□□ 0.4
USP40-212ENST00000473191 PPP1R3GB7ZBB8 358 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 NEDD8-MDP1E9PL57 170 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 BIN1O00499 593 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 STC2O76061 302 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 HMBSP08397 361 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 WASP42768 502 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 LRRC63Q05C16 580 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 CUL2Q13617 745 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 GOLGA7BQ2TAP0 167 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 RAB41Q5JT25 222 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 PLA2G2CQ5R387 149 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 ARHGAP17Q68EM7 881 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 TTI2Q6NXR4 508 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 Q6ZNB5 142 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 ACOX2Q99424 681 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 PLK2Q9NYY3 685 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 ARMCX3Q9UH62 379 aaPredicted RBP17.54■□□□□ 0.4
USP40-212ENST00000473191 RASAL2Q9UJF2 1139 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 DNMT3LQ9UJW3 386 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 TSPAN16Q9UKR8 245 aa17.54■□□□□ 0.4
USP40-212ENST00000473191 TBC1D3BA6NDS4 549 aa17.53■□□□□ 0.4
USP40-212ENST00000473191 PRRT4C9JH25 899 aa17.53■□□□□ 0.4
USP40-212ENST00000473191 RNF225M0QZC1 329 aaPredicted RBP17.53■□□□□ 0.4
USP40-212ENST00000473191 STX10O60499 249 aa17.53■□□□□ 0.4
USP40-212ENST00000473191 GABBR2O75899 941 aa17.53■□□□□ 0.4
USP40-212ENST00000473191 TYRP14679 529 aa17.53■□□□□ 0.4
USP40-212ENST00000473191 MPLP40238 635 aa17.53■□□□□ 0.4
USP40-212ENST00000473191 FMO5P49326 533 aa17.53■□□□□ 0.4
USP40-212ENST00000473191 STX17P56962 302 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms