RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, human

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIK3-208	ENST00000472648	CD27	P26842	260 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	ANXA13	P27216	316 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	RBMS1	P29558	406 aa	Known RBP	6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	NPTX2	P47972	431 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	LSS	P48449	732 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	ARRB1	P49407	418 aa	Predicted RBP	6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	TAF6	P49848	677 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	ZNF132	P52740	706 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	ASIC1	P78348	528 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	CCT2	P78371	535 aa	Known RBP	6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	GRIN1	Q05586	938 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	NPY5R	Q15761	445 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	KCNT1	Q5JUK3	1230 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	SPATA1	Q5VX52	437 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	WSCD1	Q658N2	575 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	USP53	Q70EK8	1073 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	CATSPER3	Q86XQ3	398 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	TMPRSS6	Q8IU80	811 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	SPATA2L	Q8IUW3	424 aa	Predicted RBP	6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	SAP25	Q8TEE9	199 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	EXTL1	Q92935	676 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	FAM212A	Q96EL1	285 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	TSPAN18	Q96SJ8	248 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	SEMA3C	Q99985	751 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	ASCL3	Q9NQ33	180 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	EHD2	Q9NZN4	543 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	ARHGAP28	Q9P2N2	729 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	KCNJ14	Q9UNX9	436 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	SSUH2	Q9Y2M2	353 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	SH3BP1	Q9Y3L3	701 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	STON1	Q9Y6Q2	735 aa		6.25	□□□□□ -1.41
SIK3-208	ENST00000472648	PRRT4	C9JH25	899 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	NEDD8-MDP1	E9PL57	170 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	PIR	O00625	290 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	VILL	O15195	856 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	CACNG3	O60359	315 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	NEMF	O60524	1076 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	CS	O75390	466 aa	Known RBP	6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	MED24	O75448	989 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	SEMA4F	O95754	770 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	SPATA31C1	P0DKV0	1188 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	ACP1	P24666	158 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	EPHA8	P29322	1005 aa	Predicted RBP	6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	PPP3CC	P48454	512 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	BCAT1	P54687	386 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	FOXK1	P85037	733 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	DAB2	P98082	770 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	MCL1	Q07820	350 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	KRT32	Q14532	448 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	PDIA5	Q14554	519 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	TMEM132D	Q14C87	1099 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	KYAT1	Q16773	422 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	ADCK5	Q3MIX3	580 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	ARL13B	Q3SXY8	428 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	SV2C	Q496J9	727 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	CFAP221	Q4G0U5	840 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	C3orf38	Q5JPI3	329 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	PRAMEF14	Q5SWL7	426 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	JADE1	Q6IE81	842 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	DENND5B	Q6ZUT9	1274 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	TAS1R3	Q7RTX0	852 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	TMEM25	Q86YD3	366 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	NSUN7	Q8NE18	718 aa	Known RBP	6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	ERMN	Q8TAM6	284 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	BIRC7	Q96CA5	298 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	BICD1	Q96G01	975 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	CCNL2	Q96S94	520 aa	Predicted RBP	6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	RNF38	Q9H0F5	515 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	EPN3	Q9H201	632 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	NCOA5	Q9HCD5	579 aa	Known RBP	6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	RBM19	Q9Y4C8	960 aa	Known RBP	6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	POLQ	O75417	2590 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	PTPRJ	Q12913	1337 aa		6.24	□□□□□ -1.41
SIK3-208	ENST00000472648	SPEN	Q96T58	3664 aa	Known RBP	6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	RP1	P56715	2156 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	ZNF840P	A6NDX5	716 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	CPLX1	O14810	134 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	NPC1	O15118	1278 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	SLC16A4	O15374	487 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	TRAK2	O60296	914 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	OLFM2	O95897	454 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	OAS1	P00973	400 aa	Known RBP	6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	TYR	P14679	529 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	XBP1	P17861	261 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	ACAT1	P24752	427 aa	Known RBP	6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	ACSL1	P33121	698 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	DGKG	P49619	791 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	CDH8	P55286	799 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	RACK1	P63244	317 aa	Known RBP	6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	CLN3	Q13286	438 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	E2F5	Q15329	346 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	ENOX2	Q16206	610 aa	Known RBP	6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	IGFBP7	Q16270	282 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	HS1BP3	Q53T59	392 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	INTS6L	Q5JSJ4	861 aa	Known RBP	6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	ZPBP2	Q6X784	338 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	BBS7	Q8IWZ6	715 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	CD302	Q8IX05	232 aa		6.23	□□□□□ -1.41
SIK3-208	ENST00000472648	SGF29	Q96ES7	293 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms